Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa

Plant defence inducers rapidly influence the diversity of bacterial communities in a potting mix

(2014) Lilia C. Carvalhais et al.   APPLIED SOIL ECOLOGY

MT-Toolbox: improved amplicon sequencing using molecule tags

(2014) Scott M Yourstone et al.   BMC BIOINFORMATICS

Growth–Defense Tradeoffs in Plants: A Balancing Act to Optimize Fitness

(2014) Bethany Huot et al.   Molecular Plant

The growth–defense pivot: crisis management in plants mediated by LRR-RK surface receptors

(2014) Youssef Belkhadir et al.   TRENDS IN BIOCHEMICAL SCIENCES

Systemic Acquired Resistance: Turning Local Infection into Global Defense

(2013) Zheng Qing Fu et al.   Annual Review of Plant Biology

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Development of twenty-one polymorphic tetranucleotide microsatellite loci for Schizothorax o'connori and their conservation application

(2013) Xiang-Zhao Guo et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

The salicylate 1,2-dioxygenase as a model for a conventional gentisate 1,2-dioxygenase: crystal structures of the G106A mutant and its adducts with gentisate and salicylate

(2013) Marta Ferraroni et al.   FEBS Journal

Loline alkaloid production by fungal endophytes of Fescue species select for particular epiphytic bacterial microflora

(2013) Elizabeth Roberts et al.   ISME Journal

Practical innovations for high-throughput amplicon sequencing

(2013) Derek S Lundberg et al.   NATURE METHODS

Surprisingly extensive mixed phylogenetic and ecological signals among bacterial Operational Taxonomic Units

(2013) Alexander F. Koeppel et al.   NUCLEIC ACIDS RESEARCH

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Microbial life in the phyllosphere

(2012) Julia A. Vorholt   NATURE REVIEWS MICROBIOLOGY

Hormonal Modulation of Plant Immunity

(2011) Corné M.J. Pieterse et al.   Annual Review of Cell and Developmental Biology

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

Expanded functions for a family of plant intracellular immune receptors beyond specific recognition of pathogen effectors

(2011) V. Bonardi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Understanding the Plant Immune System

(2010) Fumiaki Katagiri et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Effects of Jasmonic Acid, Ethylene, and Salicylic Acid Signaling on the Rhizosphere Bacterial Community ofArabidopsis thaliana

(2010) Rogier F. Doornbos et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Plant immunity: towards an integrated view of plant–pathogen interactions

(2010) Peter N. Dodds et al.   NATURE REVIEWS GENETICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

(2009) Victor Kunin et al.   ENVIRONMENTAL MICROBIOLOGY

A rapid biosensor-based method for quantification of free and glucose-conjugated salicylic acid

(2009) Christopher T DeFraia et al.   Plant Methods

Network Properties of Robust Immunity in Plants

(2009) Kenichi Tsuda et al.   PLoS Genetics

Making Sense of Hormone Crosstalk during Plant Immune Responses

(2008) Steven H. Spoel et al.   Cell Host & Microbe

Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers

(2008) Z. Liu et al.   NUCLEIC ACIDS RESEARCH

Improved detection of soil microorganisms using fluorescence in situ hybridization (FISH) and catalyzed reporter deposition (CARD-FISH)

(2008) Thilo Eickhorst et al.   SOIL BIOLOGY & BIOCHEMISTRY