RNA multimerization as an organizing force for liquid–liquid phase separation

Advances and Opportunities of Single-Cell Transcriptomics for Plant Research

(2021) Carolin Seyfferth et al.   Annual Review of Plant Biology

LncRNAs: Architectural Scaffolds or More Potential Roles in Phase Separation

(2021) Jie Luo et al.   Frontiers in Genetics

Long Tracts of Guanines Drive Aggregation of RNA G-Quadruplexes in the Presence of Spermine

(2021) Allison M. Williams et al.   BIOCHEMISTRY

Annotation of the local context of RNA secondary structure improves the classification and prediction of A-minors

(2021) Anna A. Shalybkova et al.   RNA

RNA sequence and structure control assembly and function of RNA condensates

(2021) Raghav R. Poudyal et al.   RNA

Are stress granules the RNA analogs of misfolded protein aggregates?

(2021) Nina Ripin et al.   RNA

Modulation of RNA Condensation by the DEAD-Box Protein eIF4A

(2020) Devin Tauber et al.   CELL

RNase L promotes the formation of unique ribonucleoprotein granules distinct from stress granules

(2020) James M. Burke et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Tissue-specific changes in the RNA structurome mediate salinity response in Arabidopsis

(2020) David C Tack et al.   RNA

Liquid-liquid phase separation and extracellular multivalent interactions in the tale of galectin-3

(2020) Yi-Ping Chiu et al.   Nature Communications

Mechanisms and Regulation of RNA Condensation in RNP Granule Formation

(2020) Devin Tauber et al.   TRENDS IN BIOCHEMICAL SCIENCES

Biomolecular Condensates in the Nucleus

(2020) Benjamin R. Sabari et al.   TRENDS IN BIOCHEMICAL SCIENCES

Emerging Roles for Phase Separation in Plants

(2020) Ryan J. Emenecker et al.   DEVELOPMENTAL CELL

A prion-like domain in ELF3 functions as a thermosensor in Arabidopsis

(2020) Jae-Hoon Jung et al.   NATURE

Prebiotically-relevant low polyion multivalency can improve functionality of membraneless compartments

(2020) Fatma Pir Cakmak et al.   Nature Communications

Protein and metabolite composition of Arabidopsis stress granules

(2019) Monika Kosmacz et al.   NEW PHYTOLOGIST

Integrative single-cell analysis

(2019) Tim Stuart et al.   NATURE REVIEWS GENETICS

Spontaneous driving forces give rise to protein−RNA condensates with coexisting phases and complex material properties

(2019) Steven Boeynaems et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Assembly of Proteins by Free RNA during the Early Phase of Proteostasis Stress

(2019) Marion Alriquet et al.   JOURNAL OF PROTEOME RESEARCH

Stress granules and neurodegeneration

(2019) Benjamin Wolozin et al.   NATURE REVIEWS NEUROSCIENCE

G-quadruplex structures trigger RNA phase separation

(2019) Yueying Zhang et al.   NUCLEIC ACIDS RESEARCH

Non-enzymatic primer extension with strand displacement

(2019) Lijun Zhou et al.   eLife

Physical Principles and Extant Biology Reveal Roles for RNA-Containing Membraneless Compartments in Origins of Life Chemistry

(2018) Raghav R. Poudyal et al.   BIOCHEMISTRY

Role of Liquid–Liquid Phase Separation in Assembly of Elastin and Other Extracellular Matrix Proteins

(2018) Lisa D. Muiznieks et al.   JOURNAL OF MOLECULAR BIOLOGY

RNA self-assembly contributes to stress granule formation and defining the stress granule transcriptome

(2018) Briana Van Treeck et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Emerging Roles for Intermolecular RNA-RNA Interactions in RNP Assemblies

(2018) Briana Van Treeck et al.   CELL

The Stress Granule Transcriptome Reveals Principles of mRNA Accumulation in Stress Granules

(2017) Anthony Khong et al.   MOLECULAR CELL

Phase Separation of C9orf72 Dipeptide Repeats Perturbs Stress Granule Dynamics

(2017) Steven Boeynaems et al.   MOLECULAR CELL

RNA phase transitions in repeat expansion disorders

(2017) Ankur Jain et al.   NATURE

Polysomes, Stress Granules, and Processing Bodies: A Dynamic Triumvirate Controlling Cytoplasmic mRNA Fate and Function

(2017) Thanin Chantarachot et al.   PLANT PHYSIOLOGY

Liquid phase condensation in cell physiology and disease

(2017) Yongdae Shin et al.   SCIENCE

Structural Basis for Ligand Binding to the Guanidine-I Riboswitch

(2017) Caroline W. Reiss et al.   STRUCTURE

Expression of Pennisetum glaucum Eukaryotic Translational Initiation Factor 4A (PgeIF4A) Confers Improved Drought, Salinity, and Oxidative Stress Tolerance in Groundnut

(2017) Tata Santosh Rama Bhadra Rao et al.   Frontiers in Plant Science

Nucleation by rRNA Dictates the Precision of Nucleolus Assembly

(2016) Hanieh Falahati et al.   CURRENT BIOLOGY

G3BP–Caprin1–USP10 complexes mediate stress granule condensation and associate with 40S subunits

(2016) Nancy Kedersha et al.   JOURNAL OF CELL BIOLOGY

RNA-Based Coacervates as a Model for Membraneless Organelles: Formation, Properties, and Interfacial Liposome Assembly

(2016) William M. Aumiller et al.   LANGMUIR

Cotranscriptional folding of a riboswitch at nucleotide resolution

(2016) Kyle E Watters et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Do nucleic acids moonlight as molecular chaperones?

(2016) Brianne E. Docter et al.   NUCLEIC ACIDS RESEARCH

Principles and Properties of Stress Granules

(2016) David S.W. Protter et al.   TRENDS IN CELL BIOLOGY

Cotranscriptional folding of a riboswitch at nucleotide resolution

(2016) Kyle E Watters et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Cancer-associated DDX3X mutations drive stress granule assembly and impair global translation

(2016) Yasmine A. Valentin-Vega et al.   Scientific Reports

Phase Separation by Low Complexity Domains Promotes Stress Granule Assembly and Drives Pathological Fibrillization

(2015) Amandine Molliex et al.   CELL

A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation

(2015) Avinash Patel et al.   CELL

Cancer-Associated Mutants of RNA Helicase DDX3X Are Defective in RNA-Stimulated ATP Hydrolysis

(2015) Leslie B. Epling et al.   JOURNAL OF MOLECULAR BIOLOGY

Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins

(2015) Yuan Lin et al.   MOLECULAR CELL

Phase Transition of a Disordered Nuage Protein Generates Environmentally Responsive Membraneless Organelles

(2015) Timothy J. Nott et al.   MOLECULAR CELL

M1 RNA is important for the in-cell solubility of its cognate C5 protein: Implications for RNA-mediated protein folding

(2015) Ahyun Son et al.   RNA Biology

Polyphosphate Is a Primordial Chaperone

(2014) Michael J. Gray et al.   MOLECULAR CELL

Toehold gene switches make big footprints

(2014) Simon Ausländer et al.   NATURE

mRNP granules

(2014) J Ross Buchan   RNA Biology

RNA triplexes: from structural principles to biological and biotech applications

(2014) Gitali Devi et al.   Wiley Interdisciplinary Reviews-RNA

Hexanucleotide Repeats in ALS/FTD Form Length-Dependent RNA Foci, Sequester RNA Binding Proteins, and Are Neurotoxic

(2013) Youn-Bok Lee et al.   Cell Reports

Hsp70 Is a Novel Posttranscriptional Regulator of Gene Expression That Binds and Stabilizes Selected mRNAs Containing AU-Rich Elements

(2012) A. Kishor et al.   MOLECULAR AND CELLULAR BIOLOGY

The DEAD-Box Protein Ded1 Modulates Translation by the Formation and Resolution of an eIF4F-mRNA Complex

(2011) Angela Hilliker et al.   MOLECULAR CELL

Molecular chaperones in protein folding and proteostasis

(2011) F. Ulrich Hartl et al.   NATURE

The Human HDV-likeCPEB3Ribozyme Is Intrinsically Fast-Reacting

(2010) Durga M. Chadalavada et al.   BIOCHEMISTRY

NUPACK: Analysis and design of nucleic acid systems

(2010) Joseph N. Zadeh et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Electrospray Mass Spectrometry of Telomeric RNA (TERRA) Reveals the Formation of Stable Multimeric G-Quadruplex Structures

(2010) Gavin W. Collie et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Cellular strategies for controlling protein aggregation

(2010) Jens Tyedmers et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Protein Aggregates: an Aging Factor Involved in Cell Death

(2008) E. Maisonneuve et al.   JOURNAL OF BACTERIOLOGY

Recruitment of the RNA Helicase RHAU to Stress Granules via a Unique RNA-binding Domain

(2008) Kateřina Chalupníková et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Protein Solubility and Folding Enhancement by Interaction with RNA

(2008) Seong Il Choi et al.   PLoS One

Adapting Proteostasis for Disease Intervention

(2008) William E. Balch et al.   SCIENCE