Species ecology explains the spatial components of genetic diversity in tropical reef fishes

Disparate dispersal limitation in Geomalacus slugs unveiled by the shape and slope of the genetic–spatial distance relationship

(2020) Carola Gómez‐Rodríguez et al.   ECOGRAPHY

Is genomic diversity a useful proxy for census population size? Evidence from a species-rich community of desert lizards

(2019) Maggie R. Grundler et al.   MOLECULAR ECOLOGY

The determinants of genetic diversity in butterflies

(2019) Alexander Mackintosh et al.   Nature Communications

The marine fish food web is globally connected

(2019) Camille Albouy et al.   Nature Ecology & Evolution

A process‐based model supports an association between dispersal and the prevalence of species traits in tropical reef fish assemblages

(2019) Giulia Francesca Azzurra Donati et al.   ECOGRAPHY

Geographic isolation and larval dispersal shape seascape genetic patterns differently according to spatial scale

(2018) Alicia Dalongeville et al.   Evolutionary Applications

Differentiation measures for conservation genetics

(2018) Lou Jost et al.   Evolutionary Applications

Diversity from genes to ecosystems: A unifying framework to study variation across biological metrics and scales

(2018) Oscar E. Gaggiotti et al.   Evolutionary Applications

Larval swimming capacities affect genetic differentiation and range size in demersal marine fishes

(2018) GB Nanninga et al.   MARINE ECOLOGY PROGRESS SERIES

Larval swimming capacities affect genetic differentiation and range size in demersal marine fishes

(2018) GB Nanninga et al.   MARINE ECOLOGY PROGRESS SERIES

An inverse latitudinal gradient in speciation rate for marine fishes

(2018) Daniel L. Rabosky et al.   NATURE

Evidence for adaptive constraints on size of marginal wing spots in the grayling butterfly, Hipparchia semele

(2018) Leonardo Dapporto et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Genetic diversity mirrors trophic ecology in coral reef fish feeding guilds

(2018) Laura Gajdzik et al.   MOLECULAR ECOLOGY

Population genomic evidence for plant glacial survival in Scandinavia

(2018) Kristine Bakke Westergaard et al.   MOLECULAR ECOLOGY

Seascape genomics reveals fine-scale patterns of dispersal for a reef fish along the ecologically divergent coast of Northwestern Australia

(2017) Joseph D. DiBattista et al.   MOLECULAR ECOLOGY

Haplotyping RAD loci: an efficient method to filter paralogs and account for physical linkage

(2017) Stuart C. Willis et al.   Molecular Ecology Resources

Population Genetics and Demography Unite Ecology and Evolution

(2017) Winsor H. Lowe et al.   TRENDS IN ECOLOGY & EVOLUTION

RAD sequencing resolves fine-scale population structure in a benthic invertebrate: implications for understanding phenotypic plasticity

(2017) David L. J. Vendrami et al.   Royal Society Open Science

Life history, larval dispersal, and connectivity in coral reef fish among the Scattered Islands of the Mozambique Channel

(2016) James L. O’Donnell et al.   CORAL REEFS

Conservation genomics of natural and managed populations: building a conceptual and practical framework

(2016) Laura Marilyn Benestan et al.   MOLECULAR ECOLOGY

Ecological and Evolutionary Drivers of Geographic Variation in Species Diversity

(2015) Paul V.A. Fine   Annual Review of Ecology Evolution and Systematics

Does population size affect genetic diversity? A test with sympatric lizard species

(2015) M T J Hague et al.   HEREDITY

Ecological traits shape genetic diversity patterns across the Mediterranean Sea: a quantitative review on fishes

(2015) Alicia Dalongeville et al.   JOURNAL OF BIOGEOGRAPHY

Degenerate adaptor sequences for detecting PCR duplicates in reduced representation sequencing data improve genotype calling accuracy

(2015) M. M. Y. Tin et al.   Molecular Ecology Resources

Dispersal Capacity Predicts Both Population Genetic Structure and Species Richness in Reef Fishes

(2014) Cynthia Riginos et al.   AMERICAN NATURALIST

Extending networks of protected areas to optimize connectivity and population growth rate

(2014) Marco Andrello et al.   ECOGRAPHY

Emergent patterns of population genetic structure for a coral reef community

(2014) Kimberly A. Selkoe et al.   MOLECULAR ECOLOGY

Comparative population genomics in animals uncovers the determinants of genetic diversity

(2014) J. Romiguier et al.   NATURE

dDocent: a RADseq, variant-calling pipeline designed for population genomics of non-model organisms

(2014) Jonathan B. Puritz et al.   PeerJ

Evolving coral reef conservation with genetic information

(2013) Maria Beger et al.   BULLETIN OF MARINE SCIENCE

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Adult and larval traits as determinants of geographic range size among tropical reef fishes

(2013) O. J. Luiz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads

(2012) Z. Chong et al.   BIOINFORMATICS

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

CONCORDANCE BETWEEN GENETIC AND SPECIES DIVERSITY IN CORAL REEF FISHES ACROSS THE PACIFIC OCEAN BIODIVERSITY GRADIENT

(2012) Vanessa Messmer et al.   EVOLUTION

Rarity and genetic diversity in Indo-PacificAcroporacorals

(2012) Zoe T. Richards et al.   Ecology and Evolution

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

High connectivity among habitats precludes the relationship between dispersal and range size in tropical reef fishes

(2011) Camilo Mora et al.   ECOGRAPHY

Coral reefs promote the evolution of morphological diversity and ecological novelty in labrid fishes

(2011) S. A. Price et al.   ECOLOGY LETTERS

Marine connectivity: a new look at pelagic larval duration and genetic metrics of dispersal

(2011) KA Selkoe et al.   MARINE ECOLOGY PROGRESS SERIES

Selectivity in Mammalian Extinction Risk and Threat Types: a New Measure of Phylogenetic Signal Strength in Binary Traits

(2010) SUSANNE A. FRITZ et al.   CONSERVATION BIOLOGY

Self-recruitment and sweepstakes reproduction amid extensive gene flow in a coral-reef fish

(2010) MARK R. CHRISTIE et al.   MOLECULAR ECOLOGY

Positive relationships between genetic diversity and abundance in fishes

(2010) MEGAN R. MCCUSKER et al.   MOLECULAR ECOLOGY

Assessing population structure: FST and related measures

(2010) PATRICK G. MEIRMANS et al.   Molecular Ecology Resources

Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data

(2010) M. Moragues et al.   THEORETICAL AND APPLIED GENETICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Population genetics, larval dispersal, and connectivity in marine systems

(2009) K Weersing et al.   MARINE ECOLOGY PROGRESS SERIES

Effective population size and patterns of molecular evolution and variation

(2009) Brian Charlesworth   NATURE REVIEWS GENETICS

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

GSTand its relatives do not measure differentiation

(2008) LOU JOST   MOLECULAR ECOLOGY