Degenerate adaptor sequences for detecting PCR duplicates in reduced representation sequencing data improve genotype calling accuracy
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Degenerate adaptor sequences for detecting PCR duplicates in reduced representation sequencing data improve genotype calling accuracy
Authors
Keywords
-
Journal
Molecular Ecology Resources
Volume 15, Issue 2, Pages 329-336
Publisher
Wiley
Online
2015-01-30
DOI
10.1111/1755-0998.12314
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Sequencing Degraded DNA from Non-Destructively Sampled Museum Specimens for RAD-Tagging and Low-Coverage Shotgun Phylogenetics
- (2014) Mandy Man-Ying Tin et al. PLoS One
- Mapping the sex determination locus in the Atlantic halibut (Hippoglossus hippoglossus) using RAD sequencing
- (2013) Christos Palaiokostas et al. BMC GENOMICS
- RESTseq – Efficient Benchtop Population Genomics with RESTriction Fragment SEQuencing
- (2013) Eckart Stolle et al. PLoS One
- Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads
- (2012) Z. Chong et al. BIOINFORMATICS
- RAD tag sequencing as a source of SNP markers in Cynara cardunculus L
- (2012) Davide Scaglione et al. BMC GENOMICS
- Special features of RAD Sequencing data: implications for genotyping
- (2012) John W. Davey et al. MOLECULAR ECOLOGY
- 2b-RAD: a simple and flexible method for genome-wide genotyping
- (2012) Shi Wang et al. NATURE METHODS
- Generalized DNA Barcode Design Based on Hamming Codes
- (2012) Leonid V. Bystrykh PLoS One
- Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
- (2012) Brant K. Peterson et al. PLoS One
- Detection of ultra-rare mutations by next-generation sequencing
- (2012) M. W. Schmitt et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Identification of SNP and SSR markers in eggplant using RAD tag sequencing
- (2011) Lorenzo Barchi et al. BMC GENOMICS
- Linkage Mapping and Comparative Genomics Using Next-Generation RAD Sequencing of a Non-Model Organism
- (2011) Simon W. Baxter et al. PLoS One
- Accurate sampling and deep sequencing of the HIV-1 protease gene using a Primer ID
- (2011) C. B. Jabara et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Detection and quantification of rare mutations with massively parallel sequencing
- (2011) I. Kinde et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Stacks : Building and Genotyping Loci De Novo From Short-Read Sequences
- (2011) Julian M. Catchen et al. G3-Genes Genomes Genetics
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Single-queen introductions characterize regional and local invasions by the facultatively clonal little fire antWasmannia auropunctata
- (2009) A. S. MIKHEYEV et al. MOLECULAR ECOLOGY
- Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes
- (2009) Iwanka Kozarewa et al. NATURE METHODS
- Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
- (2008) Nathan A. Baird et al. PLoS One
- Relict or colonizer? Extinction and range expansion of penguins in southern New Zealand
- (2008) S. Boessenkool et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started