Tryptophan metabolism and bacterial commensals prevent fungal dysbiosis in Arabidopsis roots

A fungal member of the Arabidopsis thaliana phyllosphere antagonizes Albugo laibachii via a GH25 lysozyme

(2021) Katharina Eitzen et al.   eLife

A complex immune response to flagellin epitope variation in commensal communities

(2021) Nicholas R. Colaianni et al.   Cell Host & Microbe

Signatures of antagonistic pleiotropy in a bacterial flagellin epitope

(2021) Katarzyna Parys et al.   Cell Host & Microbe

Peat-based gnotobiotic plant growth systems for Arabidopsis microbiome research

(2021) James M. Kremer et al.   Nature Protocols

Specific modulation of the root immune system by a community of commensal bacteria

(2021) Paulo J. P. L. Teixeira et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The plant NADPH oxidase RBOHD is required for microbiota homeostasis in leaves

(2021) Sebastian Pfeilmeier et al.   Nature Microbiology

Root microbiota assembly and adaptive differentiation among European Arabidopsis populations

(2020) Thorsten Thiergart et al.   Nature Ecology & Evolution

Plant Immunity: Danger Perception and Signaling

(2020) Jian-Min Zhou et al.   CELL

A plant genetic network for preventing dysbiosis in the phyllosphere

(2020) Tao Chen et al.   NATURE

Competition for iron drives phytopathogen control by natural rhizosphere microbiomes

(2020) Shaohua Gu et al.   Nature Microbiology

The Plant Microbiome: From Ecology to Reductionism and Beyond

(2020) Connor R. Fitzpatrick et al.   Annual Review of Microbiology

Differential expression of fungal genes determines the lifestyle of Plectosphaerella strains during Arabidopsis thaliana colonization

(2020) Antonio Muñoz-Barrios et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Shaping the leaf microbiota: plant–microbe–microbe interactions

(2020) Vasvi Chaudhry et al.   JOURNAL OF EXPERIMENTAL BOTANY

A single bacterial genus maintains root growth in a complex microbiome

(2020) Omri M. Finkel et al.   NATURE

A network of phosphate starvation and immune-related signaling and metabolic pathways controls the interaction between Arabidopsis thaliana and the beneficial fungus Colletotrichum tofieldiae.

(2020) Henning Frerigmann et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Root-specific camalexin biosynthesis controls the plant growth-promoting effects of multiple bacterial strains

(2019) Anna Koprivova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Beyond pathogens: microbiota interactions with the plant immune system

(2019) Paulo José PL Teixeira et al.   CURRENT OPINION IN MICROBIOLOGY

The role of CYP 71A12 monooxygenase in pathogen‐triggered tryptophan metabolism and Arabidopsis immunity

(2019) Marta Pastorczyk et al.   NEW PHYTOLOGIST

Initial soil microbiome composition and functioning predetermine future plant health

(2019) Zhong Wei et al.   Science Advances

Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome

(2019) Víctor J. Carrión et al.   SCIENCE

Microbial interactions within the plant holobiont

(2018) M. Amine Hassani et al.   Microbiome

An extracellular network of Arabidopsis leucine-rich repeat receptor kinases

(2018) Elwira Smakowska-Luzan et al.   NATURE

Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival

(2018) Paloma Durán et al.   CELL

Root microbiota drive direct integration of phosphate stress and immunity

(2017) Gabriel Castrillo et al.   NATURE

Plant signalling in symbiosis and immunity

(2017) Cyril Zipfel et al.   NATURE

Possible Interactions between the Biosynthetic Pathways of Indole Glucosinolate and Auxin

(2017) Siva K. Malka et al.   Frontiers in Plant Science

Root Endophyte Colletotrichum tofieldiae Confers Plant Fitness Benefits that Are Phosphate Status Dependent

(2016) Kei Hiruma et al.   CELL

Regulation of Pathogen-Triggered Tryptophan Metabolism in Arabidopsis thaliana by MYB Transcription Factors and Indole Glucosinolate Conversion Products

(2016) Henning Frerigmann et al.   Molecular Plant

Bacteria establish an aqueous living space in plants crucial for virulence

(2016) Xiu-Fang Xin et al.   NATURE

Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi

(2016) Stéphane Hacquard et al.   Nature Communications

Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation

(2016) Matthew T. Agler et al.   PLOS BIOLOGY

Understanding Plant Immunity as a Surveillance System to Detect Invasion

(2015) David E. Cook et al.   Annual Review of Phytopathology

Effector-Triggered Immunity: From Pathogen Perception to Robust Defense

(2015) Haitao Cui et al.   Annual Review of Plant Biology

Linking Jasmonic Acid Signaling, Root Exudates, and Rhizosphere Microbiomes

(2015) Lilia C. Carvalhais et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Functional overlap of the Arabidopsis leaf and root microbiota

(2015) Yang Bai et al.   NATURE

Mutualistic root endophytism is not associated with the reduction of saprotrophic traits and requires a noncompromised plant innate immunity

(2015) Urs Lahrmann et al.   NEW PHYTOLOGIST

TRANSCRIPTION ACTIVATOR-LIKE EFFECTOR NUCLEASE-Mediated Generation and Metabolic Analysis of Camalexin-Deficientcyp71a12 cyp71a13Double Knockout Lines

(2015) Teresa M. Müller et al.   PLANT PHYSIOLOGY

Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa

(2015) S. L. Lebeis et al.   SCIENCE

Rhizobium–legume symbioses: the crucial role of plant immunity

(2015) Benjamin Gourion et al.   TRENDS IN PLANT SCIENCE

Trophic network architecture of root-associated bacterial communities determines pathogen invasion and plant health

(2015) Zhong Wei et al.   Nature Communications

Negative regulation of ABA signaling by WRKY33 is critical for Arabidopsis immunity towards Botrytis cinerea 2100

(2015) Shouan Liu et al.   eLife

Mechanisms Underlying Robustness and Tunability in a Plant Immune Signaling Network

(2014) Yungil Kim et al.   Cell Host & Microbe

Ethylene and jasmonic acid act as negative modulators during mutualistic symbiosis betweenLaccaria bicolorandPopulusroots

(2014) Jonathan M. Plett et al.   NEW PHYTOLOGIST

The Leucine-Rich Repeat Receptor-Like Kinase BRASSINOSTEROID INSENSITIVE1-ASSOCIATED KINASE1 and the Cytochrome P450 PHYTOALEXIN DEFICIENT3 Contribute to Innate Immunity to Aphids in Arabidopsis

(2014) D. C. Prince et al.   PLANT PHYSIOLOGY

The kinase LYK5 is a major chitin receptor in Arabidopsis and forms a chitin-induced complex with related kinase CERK1

(2014) Yangrong Cao et al.   eLife

Glutathione and tryptophan metabolism are required forArabidopsisimmunity during the hypersensitive response to hemibiotrophs

(2013) Kei Hiruma et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A fine line – endophytes or pathogens in Arabidopsis thaliana

(2012) Corina Junker et al.   Fungal Ecology

Indole-3-Acetaldoxime-Derived Compounds Restrict Root Colonization in the Beneficial Interaction BetweenArabidopsisRoots and the EndophytePiriformospora indica

(2012) Pyniarlang L. Nongbri et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Hormonal Modulation of Plant Immunity

(2011) Corné M.J. Pieterse et al.   Annual Review of Cell and Developmental Biology

TheArabidopsisLeucine-Rich Repeat Receptor–Like Kinases BAK1/SERK3 and BKK1/SERK4 Are Required for Innate Immunity to Hemibiotrophic and Biotrophic Pathogens

(2011) Milena Roux et al.   PLANT CELL

Role of camalexin, indole glucosinolates, and side chain modification of glucosinolate-derived isothiocyanates in defense of Arabidopsis against Sclerotinia sclerotiorum

(2011) Henrik U. Stotz et al.   PLANT JOURNAL

Brassinosteroids modulate the efficiency of plant immune responses to microbe-associated molecular patterns

(2011) Y. Belkhadir et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Effects of Jasmonic Acid, Ethylene, and Salicylic Acid Signaling on the Rhizosphere Bacterial Community ofArabidopsis thaliana

(2010) Rogier F. Doornbos et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Tryptophan-derived secondary metabolites in Arabidopsis thaliana confer non-host resistance to necrotrophic Plectosphaerella cucumerina fungi

(2010) Andrea Sanchez-Vallet et al.   PLANT JOURNAL

Quantitative Analysis of ER Body Morphology in an Arabidopsis Mutant

(2009) Atsushi J. Nagano et al.   PLANT AND CELL PHYSIOLOGY

Network Properties of Robust Immunity in Plants

(2009) Kenichi Tsuda et al.   PLoS Genetics

Is kinase activity essential for biological functions of BRI1?

(2008) Weihui Xu et al.   CELL RESEARCH

Repression of the Auxin Response Pathway Increases Arabidopsis Susceptibility to Necrotrophic Fungi

(2008) Francisco Llorente et al.   Molecular Plant