A complex immune response to flagellin epitope variation in commensal communities

Co-incidence of Damage and Microbial Patterns Controls Localized Immune Responses in Roots

(2020) Feng Zhou et al.   CELL

Plant Immunity: Danger Perception and Signaling

(2020) Jian-Min Zhou et al.   CELL

The evolving landscape of cell surface pattern recognition across plant immune networks

(2020) Adam D Steinbrenner   CURRENT OPINION IN PLANT BIOLOGY

Regulation of Cell Type-Specific Immunity Networks in Arabidopsis Roots

(2020) Charlotte Rich-Griffin et al.   PLANT CELL

A single bacterial genus maintains root growth in a complex microbiome

(2020) Omri M. Finkel et al.   NATURE

Balancing trade-offs between biotic and abiotic stress responses through leaf age-dependent variation in stress hormone cross-talk

(2019) Matthias L. Berens et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interactive Tree Of Life (iTOL) v4: recent updates and new developments

(2019) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Beyond pathogens: microbiota interactions with the plant immune system

(2019) Paulo José PL Teixeira et al.   CURRENT OPINION IN MICROBIOLOGY

Synthetic microbiota reveal priority effects and keystone strains in the Arabidopsis phyllosphere

(2019) Charlotte I. Carlström et al.   Nature Ecology & Evolution

The effects of soil phosphorus content on plant microbiota are driven by the plant phosphate starvation response

(2019) Omri M. Finkel et al.   PLOS BIOLOGY

Arabidopsis thaliana and Pseudomonas Pathogens Exhibit Stable Associations over Evolutionary Timescales

(2018) Talia L. Karasov et al.   Cell Host & Microbe

Modular Traits of the Rhizobiales Root Microbiota and Their Evolutionary Relationship with Symbiotic Rhizobia

(2018) Ruben Garrido-Oter et al.   Cell Host & Microbe

An extracellular network of Arabidopsis leucine-rich repeat receptor kinases

(2018) Elwira Smakowska-Luzan et al.   NATURE

Spatial arrangement of several flagellins within bacterial flagella improves motility in different environments

(2018) Marco J. Kühn et al.   Nature Communications

Genomic features of bacterial adaptation to plants

(2017) Asaf Levy et al.   NATURE GENETICS

In roots of Arabidopsis thaliana, the damage-associated molecular pattern AtPep1 is a stronger elicitor of immune signalling than flg22 or the chitin heptamer

(2017) Lorenzo Poncini et al.   PLoS One

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Differentiation between MAMP Triggered Defenses in Arabidopsis thaliana

(2016) Madlen Vetter et al.   PLoS Genetics

Functional overlap of the Arabidopsis leaf and root microbiota

(2015) Yang Bai et al.   NATURE

Tissue-specific FLAGELLIN-SENSING 2 (FLS2) expression in roots restores immune responses in Arabidopsisfls2mutants

(2015) Ines Wyrsch et al.   NEW PHYTOLOGIST

A Plant Phosphoswitch Platform Repeatedly Targeted by Type III Effector Proteins Regulates the Output of Both Tiers of Plant Immune Receptors

(2014) Eui-Hwan Chung et al.   Cell Host & Microbe

Direct Regulation of the NADPH Oxidase RBOHD by the PRR-Associated Kinase BIK1 during Plant Immunity

(2014) Yasuhiro Kadota et al.   MOLECULAR CELL

Selective regulation of the chitin-induced defense response by the Arabidopsis receptor-like cytoplasmic kinase PBL27

(2014) Tomonori Shinya et al.   PLANT JOURNAL

Tyrosine phosphorylation of protein kinase complex BAK1/BIK1 mediatesArabidopsisinnate immunity

(2014) Wenwei Lin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The growth–defense pivot: crisis management in plants mediated by LRR-RK surface receptors

(2014) Youssef Belkhadir et al.   TRENDS IN BIOCHEMICAL SCIENCES

A Method for generating marker-less gene deletions in multidrug-resistant Acinetobacter baumannii

(2013) Ismawati Amin et al.   BMC MICROBIOLOGY

Innate immune recognition of the microbiota promotes host-microbial symbiosis

(2013) Hiutung Chu et al.   NATURE IMMUNOLOGY

Allelic variation in two distinctPseudomonas syringaeflagellin epitopes modulates the strength of plant immune responses but not bacterial motility

(2013) Christopher R. Clarke et al.   NEW PHYTOLOGIST

Structural Basis for flg22-Induced Activation of the Arabidopsis FLS2-BAK1 Immune Complex

(2013) Y. Sun et al.   SCIENCE

Seq2Logo: a method for construction and visualization of amino acid binding motifs and sequence profiles including sequence weighting, pseudo counts and two-sided representation of amino acid enrichment and depletion

(2012) Martin Christen Frølund Thomsen et al.   NUCLEIC ACIDS RESEARCH

Chimeric FLS2 Receptors Reveal the Basis for Differential Flagellin Perception in Arabidopsis and Tomato

(2012) K. Mueller et al.   PLANT CELL

Brassinosteroids inhibit pathogen-associated molecular pattern-triggered immune signaling independent of the receptor kinase BAK1

(2011) C. Albrecht et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Brassinosteroids modulate the efficiency of plant immune responses to microbe-associated molecular patterns

(2011) Y. Belkhadir et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phosphorylation-Dependent Differential Regulation of Plant Growth, Cell Death, and Innate Immunity by the Regulatory Receptor-Like Kinase BAK1

(2011) Benjamin Schwessinger et al.   PLoS Genetics

Hidden Markov model speed heuristic and iterative HMM search procedure

(2010) L Steven Johnson et al.   BMC BIOINFORMATICS

Innate Immune Responses Activated in Arabidopsis Roots by Microbe-Associated Molecular Patterns

(2010) Y. A. Millet et al.   PLANT CELL

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Plant and Animal Sensors of Conserved Microbial Signatures

(2010) P. C. Ronald et al.   SCIENCE

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Control of the pattern-recognition receptor EFR by an ER protein complex in plant immunity

(2009) Vladimir Nekrasov et al.   EMBO JOURNAL

Roles of Multiple Flagellins in Flagellar Formation and Flagellar Growth Post Bdelloplast Lysis in Bdellovibrio bacteriovorus

(2009) Yoshiko Iida et al.   JOURNAL OF MOLECULAR BIOLOGY

Uncoupling of sustained MAMP receptor signaling from early outputs in an Arabidopsis endoplasmic reticulum glucosidase II allele

(2009) Xunli Lu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Simultaneous Inference in General Parametric Models

(2008) Torsten Hothorn et al.   BIOMETRICAL JOURNAL

An allelic exchange system for compliant genetic manipulation of the select agents Burkholderia pseudomallei and Burkholderia mallei

(2008) Mohamad A. Hamad et al.   GENE

Polar, Peritrichous, and Lateral Flagella Belong to Three Distinguishable Flagellar Families

(2008) Mikako Fujii et al.   JOURNAL OF MOLECULAR BIOLOGY

Amino Acid Sequence of Bacterial Microbe-Associated Molecular Pattern flg22 Is Required for Virulence

(2008) Kana Naito et al.   MOLECULAR PLANT-MICROBE INTERACTIONS