X-ray microscopy enables multiscale high-resolution 3D imaging of plant cells, tissues, and organs

Preparation, Scanning and Analysis of Duckweed Using X-Ray Computed Microtomography

(2021) Dylan H. Jones et al.   Frontiers in Plant Science

Fossil palm reading: using fruits to reveal the deep roots of palm diversity

(2021) Kelly K.S. Matsunaga et al.   AMERICAN JOURNAL OF BOTANY

Gaseous environment modulates volatile emission and viability loss during seed artificial ageing

(2021) Biao Han et al.   PLANTA

Fruit evolution in Hydrophyllaceae

(2021) Maria‐Anna Vasile et al.   AMERICAN JOURNAL OF BOTANY

X-ray computed tomography in life sciences

(2020) Shelley D. Rawson et al.   BMC BIOLOGY

A Synchrotron X-ray Imaging Strategy to Map Large Animal Brains

(2020) An-Lun Chin et al.   CHINESE JOURNAL OF PHYSICS

Imaging flowers: a guide to current microscopy and tomography techniques to study flower development

(2020) Nathanaël Prunet et al.   JOURNAL OF EXPERIMENTAL BOTANY

Linking root structure to functionality: the impact of root system architecture on citrate‐enhanced phosphate uptake

(2020) Daniel M. McKay Fletcher et al.   NEW PHYTOLOGIST

Comprehensive 3D phenotyping reveals continuous morphological variation across genetically diverse sorghum inflorescences

(2020) Mao Li et al.   NEW PHYTOLOGIST

An acyl-CoA N-acyltransferase regulates meristem phase change and plant architecture in barley

(2020) Agatha Walla et al.   PLANT PHYSIOLOGY

Genetically encoded X-ray cellular imaging for nanoscale protein localization

(2020) Huating Kong et al.   National Science Review

Dicer-like 5 deficiency confers temperature-sensitive male sterility in maize

(2020) Chong Teng et al.   Nature Communications

Accurate and versatile 3D segmentation of plant tissues at cellular resolution

(2020) Adrian Wolny et al.   eLife

Digitally deconstructing leaves in 3D using X‐ray microcomputed tomography and machine learning

(2020) Guillaume Théroux‐Rancourt et al.   Applications in Plant Sciences

Assaying Three-Dimensional Cellular Architecture using X-Ray Tomographic and Correlated Imaging Approaches

(2020) Peter O Bayguinov et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Sterile Spikelets Contribute to Yield in Sorghum and Related Grasses

(2020) Taylor AuBuchon-Elder et al.   PLANT CELL

3D Visualization and Volume-Based Quantification of Rice Chalkiness In Vivo by Using High Resolution Micro-CT

(2020) Yi Su et al.   Rice

Global Topological Order Emerges through Local Mechanical Control of Cell Divisions in the Arabidopsis Shoot Apical Meristem

(2019) Matthew D.B. Jackson et al.   Cell Systems

Three‐dimensional reconstruction of soybean nodules provides an update on vascular structure

(2019) David Livingston et al.   AMERICAN JOURNAL OF BOTANY

Three-dimensional Time-lapse Analysis Reveals Multiscale Relationships in Maize Root Systems with Contrasting Architectures

(2019) Ni Jiang et al.   PLANT CELL

Laser ablation tomography for visualization of root colonization by edaphic organisms

(2019) Christopher F Strock et al.   JOURNAL OF EXPERIMENTAL BOTANY

Macro-to-nanoscale investigation of wall-plate joints in the acorn barnacle Semibalanus balanoides : correlative imaging, biological form and function, and bioinspiration

(2019) R. L. Mitchell et al.   Journal of the Royal Society Interface

Cell and chloroplast anatomical features are poorly estimated from two‐dimensional cross sections

(2019) Richard Harwood et al.   NEW PHYTOLOGIST

Modularity and evolution of flower shape: the role of function, development, and spandrels in Erica

(2019) Dieter Reich et al.   NEW PHYTOLOGIST

GRANAR, a computational tool to better understand the functional importance of monocotyledon root anatomy

(2019) Adrien Heymans et al.   PLANT PHYSIOLOGY

Stabilizing gold nanoparticles for use in X-ray computed tomography imaging of soil systems

(2019) Callum P. Scotson et al.   Royal Society Open Science

Towards an integrative understanding of stamen–corolla tube modifications and floral architecture in Boraginaceae s.s. (Boraginales)

(2019) Julius Jeiter et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

Gynoecium and Fruit Development in Heliotropium Sect. Heliothamnus (Heliotropiaceae)

(2018) Julius Jeiter et al.   INTERNATIONAL JOURNAL OF PLANT SCIENCES

Ultrastructural localisation of protein interactions using conditionally stable nanobodies

(2018) Nicholas Ariotti et al.   PLOS BIOLOGY

High-quality ultrastructural preservation using cryofixation for 3D electron microscopy of genetically labeled tissues

(2018) Tin Ki Tsang et al.   eLife

The Symbiosome: Legume and Rhizobia Co-evolution toward a Nitrogen-Fixing Organelle?

(2018) Teodoro Coba de la Peña et al.   Frontiers in Plant Science

High-resolution synchrotron-based X-ray microtomography as a tool to unveil the three-dimensional neuronal architecture of the brain

(2018) Matheus de Castro Fonseca et al.   Scientific Reports

Beneficial Services of Arbuscular Mycorrhizal Fungi – From Ecology to Application

(2018) Min Chen et al.   Frontiers in Plant Science

Investigating the microstructure of plant leaves in 3D with lab-based X-ray computed tomography

(2018) Andrew W. Mathers et al.   Plant Methods

Large Volume Electron Microscopy and Neural Microcircuit Analysis

(2018) Yoshiyuki Kubota et al.   Frontiers in Neural Circuits

Deep Sequential Segmentation of Organs in Volumetric Medical Scans

(2018) Alexey A. Novikov et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Novel computed tomography-based tools reliably quantify plant reproductive investment

(2017) Y M Staedler et al.   JOURNAL OF EXPERIMENTAL BOTANY

High-performance serial block-face SEM of nonconductive biological samples enabled by focal gas injection-based charge compensation

(2017) T.J. DEERINCK et al.   JOURNAL OF MICROSCOPY

Electron microscopy using the genetically encoded APEX2 tag in cultured mammalian cells

(2017) Jeffrey D Martell et al.   Nature Protocols

High-resolution synchrotron imaging shows that root hairs influence rhizosphere soil structure formation

(2017) Nicolai Koebernick et al.   NEW PHYTOLOGIST

Brassinosteroids Modulate Meristem Fate and Differentiation of Unique Inflorescence Morphology inSetaria viridis

(2017) Jiani Yang et al.   PLANT CELL

Non-destructive determination of floral staging in cereals using X-ray micro computed tomography (µCT)

(2017) Saoirse R. Tracy et al.   Plant Methods

Super-resolution Microscopy – Applications in Plant Cell Research

(2017) Veit Schubert   Frontiers in Plant Science

Plant phenomics: an overview of image acquisition technologies and image data analysis algorithms

(2017) Fernando Perez-Sanz et al.   GigaScience

Volume scanning electron microscopy for imaging biological ultrastructure

(2016) Benjamin Titze et al.   BIOLOGY OF THE CELL

Quantifying morphogenesis in plants in 4D

(2016) George W Bassel et al.   CURRENT OPINION IN PLANT BIOLOGY

Serial block face scanning electron microscopy and the reconstruction of plant cell membrane systems

(2016) M. KITTELMANN et al.   JOURNAL OF MICROSCOPY

Genetically targeted 3D visualisation of Drosophila neurons under Electron Microscopy and X-Ray Microscopy using miniSOG

(2016) Julian Ng et al.   Scientific Reports

Challenges of microtome-based serial block-face scanning electron microscopy in neuroscience

(2015) A. A. WANNER et al.   JOURNAL OF MICROSCOPY

Large-volume en-bloc staining for electron microscopy-based connectomics

(2015) Yunfeng Hua et al.   Nature Communications

X-Ray Microscopy as an Approach to Increasing Accuracy and Efficiency of Serial Block-Face Imaging for Correlated Light and Electron Microscopy of Biological Specimens

(2014) Eric A. Bushong et al.   MICROSCOPY AND MICROANALYSIS

3D Plant Cell Architecture of Arabidopsis thaliana (Brassicaceae) Using Focused Ion Beam–Scanning Electron Microscopy

(2014) Bhawana et al.   Applications in Plant Sciences

Metabolism and development - integration of micro computed tomography data and metabolite profiling reveals metabolic reprogramming from floral initiation to silique development

(2013) Anke Bellaire et al.   NEW PHYTOLOGIST

Histological and Micro-CT Evidence of Stigmatic Rostellum Receptivity Promoting Auto-Pollination in the Madagascan Orchid Bulbophyllum bicoloratum

(2013) Alexander Gamisch et al.   PLoS One

Plant Tissues in 3D via X-Ray Tomography: Simple Contrasting Methods Allow High Resolution Imaging

(2013) Yannick M. Staedler et al.   PLoS One

Early inflorescence development in the grasses (Poaceae)

(2013) Elizabeth A. Kellogg et al.   Frontiers in Plant Science

Microwaves and tea: new tools to process plant tissue for transmission electron microscopy

(2012) ANAÏS CARPENTIER et al.   JOURNAL OF MICROSCOPY

Soft X-ray microscopy analysis of cell volume and hemoglobin content in erythrocytes infected with asexual and sexual stages of Plasmodium falciparum

(2011) Eric Hanssen et al.   JOURNAL OF STRUCTURAL BIOLOGY

Perfluorodecalin enhances in vivo confocal microscopy resolution of Arabidopsis thaliana mesophyll

(2010) George R. Littlejohn et al.   NEW PHYTOLOGIST

Three-dimensional geometric morphometrics for studying floral shape variation

(2010) Timotheüs van der Niet et al.   TRENDS IN PLANT SCIENCE

Plant structure visualization by high-resolution X-ray computed tomography

(2010) Stijn Dhondt et al.   TRENDS IN PLANT SCIENCE

MicroCT for developmental biology: A versatile tool for high-contrast 3D imaging at histological resolutions

(2009) Brian D. Metscher   DEVELOPMENTAL DYNAMICS

A new preparation method to study fresh plant structures with X-ray computed tomography

(2009) O. LEROUX et al.   JOURNAL OF MICROSCOPY

Microwave-assisted rapid plant sample preparation for transmission electron microscopy

(2009) B. ZECHMANN et al.   JOURNAL OF MICROSCOPY

Specification of Cortical Parenchyma and Stele of Maize Primary Roots by Asymmetric Levels of Auxin, Cytokinin, and Cytokinin-Regulated Proteins

(2009) M. Saleem et al.   PLANT PHYSIOLOGY

Quantitative analysis of heterogeneous spatial distribution of Arabidopsis leaf trichomes using micro X-ray computed tomography

(2008) Eli Kaminuma et al.   PLANT JOURNAL