Photothermal mediated rolling circle amplification toward specific and direct in situ mRNA detection

GIPC2 is an endocrine-specific tumor suppressor gene for both sporadic and hereditary tumors of RET- and SDHB-, but not VHL-associated clusters of pheochromocytoma/paraganglioma

(2021) Yeqing Dong et al.   Cell Death & Disease

CRISPR-Cas12a based internal negative control for nonspecific products of exponential rolling circle amplification

(2020) Bo Tian et al.   NUCLEIC ACIDS RESEARCH

Simultaneous Optical Photothermal Infrared (O-PTIR) and Raman Spectroscopy of Submicrometer Atmospheric Particles

(2020) Nicole E. Olson et al.   ANALYTICAL CHEMISTRY

Visualization of individual microRNA molecules in fixed cells and tissues using target-primed padlock probe assay

(2020) Chen Lin et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Two-dimensional correlation analysis of highly spatially resolved simultaneous IR and Raman spectral imaging of bioplastics composite using optical photothermal Infrared and Raman spectroscopy

(2020) Curtis Marcott et al.   JOURNAL OF MOLECULAR STRUCTURE

Ultrasensitive Detection of Attomolar Protein Concentrations by Dropcast Single Molecule Assays

(2020) Connie Wu et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Small extrachromosomal circular DNAs, microDNA, produce short regulatory RNAs that suppress gene expression independent of canonical promoters

(2019) Teressa Paulsen et al.   NUCLEIC ACIDS RESEARCH

Ultrasensitive Real-Time Rolling Circle Amplification Detection Enhanced by Nicking-Induced Tandem-Acting Polymerases

(2019) Bo Tian et al.   ANALYTICAL CHEMISTRY

Probabilistic cell typing enables fine mapping of closely related cell types in situ

(2019) Xiaoyan Qian et al.   NATURE METHODS

Rolling circle amplification for single cell analysis and in situ sequencing

(2019) Hua Gao et al.   TRAC-TRENDS IN ANALYTICAL CHEMISTRY

Circular DNA elements of chromosomal origin are common in healthy human somatic tissue

(2018) Henrik Devitt Møller et al.   Nature Communications

Cell-penetrating Peptide-modified Targeted Drug-loaded Phase-transformation Lipid Nanoparticles Combined with Low-intensity Focused Ultrasound for Precision Theranostics against Hepatocellular Carcinoma

(2018) Hongyun Zhao et al.   Theranostics

Membrane expression of thymidine kinase 1 and potential clinical relevance in lung, breast, and colorectal malignancies

(2018) Evita G. Weagel et al.   Cancer Cell International

Hyperbranched rolling circle amplification (HRCA)-based fluorescence biosensor for ultrasensitive and specific detection of single-nucleotide polymorphism genotyping associated with the therapy of chronic hepatitis B virus infection

(2018) Xiang-Hui Li et al.   TALANTA

Biological Photothermal Nanodots Based on Self-Assembly of Peptide–Porphyrin Conjugates for Antitumor Therapy

(2017) Qianli Zou et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Enzymatic production of single-molecule FISH and RNA capture probes

(2017) Imre Gaspar et al.   RNA

Highly specific imaging of mRNA in single cells by target RNA-initiated rolling circle amplification

(2017) Ruijie Deng et al.   Chemical Science

Intricate and Cell Type-Specific Populations of Endogenous Circular DNA (eccDNA) in Caenorhabditis elegans and Homo sapiens

(2017) Massa J. Shoura et al.   G3-Genes Genomes Genetics

The Discovery of Rolling Circle Amplification and Rolling Circle Transcription

(2016) Michael G. Mohsen et al.   ACCOUNTS OF CHEMICAL RESEARCH

Spontaneous Internalization of Cell Penetrating Peptide-Modified Nanowires into Primary Neurons

(2016) Jae-Hyun Lee et al.   NANO LETTERS

Improvement of rolling circle amplification efficiency with gold nanoparticles

(2015) Q. Liu et al.   MATERIALS RESEARCH INNOVATIONS

Strength in numbers: quantitative single-molecule RNA detection assays

(2015) Imre Gaspar et al.   Wiley Interdisciplinary Reviews-Developmental Biology

Toehold-initiated Rolling Circle Amplification for Visualizing Individual MicroRNAs In Situ in Single Cells

(2014) Ruijie Deng et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Highly specific DNA detection from massive background nucleic acids based on rolling circle amplification of target dsDNA

(2014) Xingyu Wang et al.   RSC Advances

Ablation of Hypoxic Tumors with Dose-Equivalent Photothermal, but Not Photodynamic, Therapy Using a Nanostructured Porphyrin Assembly

(2013) Cheng S. Jin et al.   ACS Nano

In situ sequencing for RNA analysis in preserved tissue and cells

(2013) Rongqin Ke et al.   NATURE METHODS

In situ detection of individual mRNA molecules and protein complexes or post-translational modifications using padlock probes combined with the in situ proximity ligation assay

(2013) Irene Weibrecht et al.   Nature Protocols

Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

(2012) Jian Ye et al.   BMC BIOINFORMATICS

Thymidine kinase and cancer monitoring

(2011) Stefan Aufderklamm et al.   CANCER LETTERS

In situ detection and genotyping of individual mRNA molecules

(2010) Chatarina Larsson et al.   NATURE METHODS

Novel application of Phi29 DNA polymerase: RNA detection and analysis in vitro and in situ by target RNA-primed RCA

(2009) A. Lagunavicius et al.   RNA

Sensitive isothermal detection of nucleic-acid sequence by primer generation–rolling circle amplification

(2008) Taku Murakami et al.   NUCLEIC ACIDS RESEARCH