Label-Free Dynamic Imaging of Chromatin in Live Cell Nuclei by High-Speed Scattering-Based Interference Microscopy

Single-cell cytometry via multiplexed fluorescence prediction by label-free reflectance microscopy

(2021) Shiyi Cheng et al.   Science Advances

Nanoscopic Structural Fluctuations of Disassembling Microtubules Revealed by Label‐Free Super‐Resolution Microscopy

(2021) Milan Vala et al.   Small Methods

Mass photometry enables label-free tracking and mass measurement of single proteins on lipid bilayers

(2021) Eric D. B. Foley et al.   NATURE METHODS

3D ATAC-PALM: super-resolution imaging of the accessible genome

(2020) Liangqi Xie et al.   NATURE METHODS

Revealing architectural order with quantitative label-free imaging and deep learning

(2020) Syuan-Ming Guo et al.   eLife

Phase imaging with computational specificity (PICS) for measuring dry mass changes in sub-cellular compartments

(2020) Mikhail E. Kandel et al.   Nature Communications

Chromatin accessibility and the regulatory epigenome

(2019) Sandy L. Klemm et al.   NATURE REVIEWS GENETICS

Measuring Mobility in Chromatin by Intensity-Sorted FCS

(2019) Melody Di Bona et al.   BIOPHYSICAL JOURNAL

Biophysics of Chromatin Dynamics

(2019) Beat Fierz et al.   Annual Review of Biophysics

Interferometric Scattering Microscopy

(2019) Gavin Young et al.   Annual Review of Physical Chemistry

Multimodal interference-based imaging of nanoscale structure and macromolecular motion uncovers UV induced cellular paroxysm

(2019) Scott Gladstein et al.   Nature Communications

Chromatin nanoscale compaction in live cells visualized by acceptor‐to‐donor ratio corrected FRET between DNA dyes

(2019) Simone Pelicci et al.   Journal of Biophotonics

Interferometric Scattering Microscopy: Seeing Single Nanoparticles and Molecules via Rayleigh Scattering

(2019) Richard W. Taylor et al.   NANO LETTERS

Single Cell Imaging of Nuclear Architecture Changes

(2019) Rikke Brandstrup Morrish et al.   Frontiers in Cell and Developmental Biology

Measurements of the self-assembly kinetics of individual viral capsids around their RNA genome

(2019) Rees F. Garmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Studying nucleic envelope and plasma membrane mechanics of eukaryotic cells using confocal reflectance interferometric microscopy

(2019) Vijay Raj Singh et al.   Nature Communications

In Silico Labeling: Predicting Fluorescent Labels in Unlabeled Images

(2018) Eric M. Christiansen et al.   CELL

Quantitative mass imaging of single biological macromolecules

(2018) Gavin Young et al.   SCIENCE

Label-free and live cell imaging by interferometric scattering microscopy

(2018) Jin-Sung Park et al.   Chemical Science

Single-molecule FRET reveals multiscale chromatin dynamics modulated by HP1α

(2018) Sinan Kilic et al.   Nature Communications

The live cell DNA stain SiR-Hoechst induces DNA damage responses and impairs cell cycle progression

(2018) Onur Sen et al.   Scientific Reports

Label-free prediction of three-dimensional fluorescence images from transmitted-light microscopy

(2018) Chawin Ounkomol et al.   NATURE METHODS

Super-Resolution Imaging of Higher-Order Chromatin Structures at Different Epigenomic States in Single Mammalian Cells

(2018) Jianquan Xu et al.   Cell Reports

Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells

(2018) Bogdan Bintu et al.   SCIENCE

Reflection phase microscopy using spatio-temporal coherence of light

(2018) Youngwoon Choi et al.   Optica

Emerging roles of mechanical forces in chromatin regulation

(2017) Yekaterina A. Miroshnikova et al.   JOURNAL OF CELL SCIENCE

A microfluidic device for characterizing nuclear deformations

(2017) Andrew C. Hodgson et al.   LAB ON A CHIP

Density imaging of heterochromatin in live cells using orientation-independent-DIC microscopy

(2017) Ryosuke Imai et al.   MOLECULAR BIOLOGY OF THE CELL

Chromatin and lamin A determine two different mechanical response regimes of the cell nucleus

(2017) Andrew D. Stephens et al.   MOLECULAR BIOLOGY OF THE CELL

Myc Regulates Chromatin Decompaction and Nuclear Architecture during B Cell Activation

(2017) Kyong-Rim Kieffer-Kwon et al.   MOLECULAR CELL

Dynamic Organization of Chromatin Domains Revealed by Super-Resolution Live-Cell Imaging

(2017) Tadasu Nozaki et al.   MOLECULAR CELL

Label-free, ultrahigh-speed, 3D observation of bidirectional and correlated intracellular cargo transport by coherent brightfield microscopy

(2017) Yi-Fan Huang et al.   Nanoscale

Dynamic chromatin technologies: from individual molecules to epigenomic regulation in cells

(2017) Olivier Cuvier et al.   NATURE REVIEWS GENETICS

Regulation of genome organization and gene expression by nuclear mechanotransduction

(2017) Caroline Uhler et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells

(2017) Horng D. Ou et al.   SCIENCE

Quantitative FLIM-FRET Microscopy to Monitor Nanoscale Chromatin Compaction In Vivo Reveals Structural Roles of Condensin Complexes

(2017) David Llères et al.   Cell Reports

The Global Relationship between Chromatin Physical Topology, Fractal Structure and Gene Expression

(2017) L. M. Almassalha et al.   Scientific Reports

Chromosome conformation capture technologies and their impact in understanding genome function

(2016) Satish Sati et al.   CHROMOSOMA

Phase correlation imaging of unlabeled cell dynamics

(2016) Lihong Ma et al.   Scientific Reports

Chromatin Fibers Are Formed by Heterogeneous Groups of Nucleosomes In Vivo

(2015) Maria Aurelia Ricci et al.   CELL

The impact of DNA intercalators on DNA and DNA-processing enzymes elucidated through force-dependent binding kinetics

(2015) Andreas S. Biebricher et al.   Nature Communications

Quantitative super-resolution microscopy: pitfalls and strategies for image analysis

(2014) Nela Durisic et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Tracking Single Particles on Supported Lipid Membranes: Multimobility Diffusion and Nanoscopic Confinement

(2014) Chia-Lung Hsieh et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Auxetic nuclei in embryonic stem cells exiting pluripotency

(2014) Stefano Pagliara et al.   NATURE MATERIALS

Shot-noise limited localization of single 20 nm gold particles with nanometer spatial precision within microseconds

(2014) Ying-Hsiu Lin et al.   OPTICS EXPRESS

Direct optical sensing of single unlabelled proteins and super-resolution imaging of their binding sites

(2014) Marek Piliarik et al.   Nature Communications

Laser speckle contrast imaging: theoretical and practical limitations

(2013) David Briers et al.   JOURNAL OF BIOMEDICAL OPTICS

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

(2013) Takashi Nagano et al.   NATURE

Modulation of Higher Order Chromatin Conformation in Mammalian Cell Nuclei Can Be Mediated by Polyamines and Divalent Cations

(2013) Ashwat Visvanathan et al.   PLoS One

Chromatin Decondensation and Nuclear Softening Accompany Nanog Downregulation in Embryonic Stem Cells

(2012) Kevin J. Chalut et al.   BIOPHYSICAL JOURNAL

Chromatin organization and transcriptional regulation

(2012) Michael R Hübner et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

A decade of 3C technologies: insights into nuclear organization

(2012) E. de Wit et al.   GENES & DEVELOPMENT

Immunolabeling artifacts and the need for live-cell imaging

(2012) Ulrike Schnell et al.   NATURE METHODS

Interferometric scattering microscopy (iSCAT): new frontiers in ultrafast and ultrasensitive optical microscopy

(2012) Jaime Ortega-Arroyo et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Regulation of chromatin by histone modifications

(2011) Andrew J Bannister et al.   CELL RESEARCH

Label-free imaging of intracellular motility by low-coherent quantitative phase microscopy

(2011) Toyohiko Yamauchi et al.   OPTICS EXPRESS

Influence of the live cell DNA marker DRAQ5 on chromatin-associated processes

(2010) Pierre-Olivier Mari et al.   DNA REPAIR

Quantitative analysis of chromatin compaction in living cells using FLIM–FRET

(2009) David Llères et al.   JOURNAL OF CELL BIOLOGY

Partial-wave microscopic spectroscopy detects subwavelength refractive index fluctuations: an application to cancer diagnosis

(2009) Hariharan Subramanian et al.   OPTICS LETTERS

Real-time imaging of histone H4 hyperacetylation in living cells

(2009) K. Sasaki et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interaction of a DNA intercalator DRAQ5, and a minor groove binder SYTO17, with chromatin in live cells-Influence on chromatin organization and histone-DNA interactions

(2008) Krzysztof Wojcik et al.   CYTOMETRY PART A