A Two-Step PCR Protocol Enabling Flexible Primer Choice and High Sequencing Yield for Illumina MiSeq Meta-Barcoding

Evidence for Co-evolutionary History of Early Diverging Lycopodiaceae Plants With Fungi

(2020) Gian Maria Niccolò Benucci et al.   Frontiers in Microbiology

Crop Management Impacts the Soybean (Glycine max) Microbiome

(2020) Reid Longley et al.   Frontiers in Microbiology

Ectomycorrhizal fungi and soil enzymes exhibit contrasting patterns along elevation gradients in southern Patagonia

(2019) Camille Truong et al.   NEW PHYTOLOGIST

Soil bacterial and fungal communities of six bahiagrass cultivars

(2019) Lukas Beule et al.   PeerJ

Effects of rhizoma peanut cultivars ( Arachis glabrata Benth.) on the soil bacterial diversity and predicted function in nitrogen fixation

(2019) Xiao‐Bo Wang et al.   Ecology and Evolution

RNA-based analyses reveal fungal communities structured by a senescence gradient in the moss Dicranum scoparium and the presence of putative multi-trophic fungi

(2018) Ko-Hsuan Chen et al.   NEW PHYTOLOGIST

Accurate Estimation of Fungal Diversity and Abundance through Improved Lineage-Specific Primers Optimized for Illumina Amplicon Sequencing

(2016) D. Lee Taylor et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

DNA Source Selection for Downstream Applications Based on DNA Quality Indicators Analysis

(2016) Gema Lucena-Aguilar et al.   BIOPRESERVATION AND BIOBANKING

DNA Source Selection for Downstream Applications Based on DNA Quality Indicators Analysis

(2016) Gema Lucena-Aguilar et al.   Biopreservation and Biobanking

Tag jumps illuminated - reducing sequence-to-sample misidentifications in metabarcoding studies

(2015) Ida Baerholm Schnell et al.   Molecular Ecology Resources

Metatranscriptomic analysis of ectomycorrhizal roots reveals genes associated withPiloderma-Pinussymbiosis: improved methodologies for assessing gene expressionin situ

(2014) H.-L. Liao et al.   ENVIRONMENTAL MICROBIOLOGY

Sequence Depth, Not PCR Replication, Improves Ecological Inference from Next Generation DNA Sequencing

(2014) Dylan P. Smith et al.   PLoS One

Development of a Prokaryotic Universal Primer for Simultaneous Analysis of Bacteria and Archaea Using Next-Generation Sequencing

(2014) Shunsuke Takahashi et al.   PLoS One

An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform

(2014) Douglas W Fadrosh et al.   Microbiome

Practical innovations for high-throughput amplicon sequencing

(2013) Derek S Lundberg et al.   NATURE METHODS

PCR inhibitors - occurrence, properties and removal

(2012) C. Schrader et al.   JOURNAL OF APPLIED MICROBIOLOGY

Touchdown PCR for increased specificity and sensitivity in PCR amplification

(2008) Darren J Korbie et al.   Nature Protocols