Conflicting and ambiguous names of overlapping ORFs in the SARS-CoV-2 genome: A homology-based resolution
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Title
Conflicting and ambiguous names of overlapping ORFs in the SARS-CoV-2 genome: A homology-based resolution
Authors
Keywords
Accessory protein, Alternative reading frame, Nomenclature, Open reading frame, ORF3b, ORF3d, ORF9a, ORF9b, Overlapping ORF, SARS-CoV-2, ORF3c, ORF2b
Journal
VIROLOGY
Volume 558, Issue -, Pages 145-151
Publisher
Elsevier BV
Online
2021-03-18
DOI
10.1016/j.virol.2021.02.013
References
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Note: Only part of the references are listed.- SARS-CoV-2 gene content and COVID-19 mutation impact by comparing 44 Sarbecovirus genomes
- (2021) Irwin Jungreis et al. Nature Communications
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- (2020) Roujian Lu et al. LANCET
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- (2020) Fan Wu et al. NATURE
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- (2020) Na Zhu et al. NEW ENGLAND JOURNAL OF MEDICINE
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- (2020) Jasper Fuk-Woo Chan et al. Emerging Microbes & Infections
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- (2020) Nature Microbiology
- The Architecture of SARS-CoV-2 Transcriptome
- (2020) Dongwan Kim et al. CELL
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- (2020) Denisa Bojkova et al. NATURE
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- (2020) David E. Gordon et al. NATURE
- Factors preventing materno-fetal transmission of SARS-CoV-2
- (2020) Onder Celik et al. PLACENTA
- New insights into the evolutionary features of viral overlapping genes by discriminant analysis
- (2020) Angelo Pavesi VIROLOGY
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- (2020) Sepideh Sadegh et al. Nature Communications
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- (2020) Mariangela Garofalo et al. Vaccines
- SARS-CoV-2 Disrupts Splicing, Translation, and Protein Trafficking to Suppress Host Defenses
- (2020) Abhik K. Banerjee et al. CELL
- Coding potential and sequence conservation of SARS-CoV-2 and related animal viruses
- (2020) Rachele Cagliani et al. INFECTION GENETICS AND EVOLUTION
- Type I interferon susceptibility distinguishes SARS-CoV-2 from SARS-CoV.
- (2020) Kumari G. Lokugamage et al. JOURNAL OF VIROLOGY
- ORF8 and ORF3b antibodies are accurate serological markers of early and late SARS-CoV-2 infection
- (2020) Asmaa Hachim et al. NATURE IMMUNOLOGY
- Dynamically evolving novel overlapping gene as a factor in the SARS-CoV-2 pandemic
- (2020) Chase W Nelson et al. eLife
- Post-translational modifications of coronavirus proteins: roles and function
- (2018) To Sing Fung et al. Future Virology
- A Simple Method to Detect Candidate Overlapping Genes in Viruses Using Single Genome Sequences
- (2018) Timothy E Schlub et al. MOLECULAR BIOLOGY AND EVOLUTION
- Origin and evolution of pathogenic coronaviruses
- (2018) Jie Cui et al. NATURE REVIEWS MICROBIOLOGY
- Expanded subgenomic mRNA transcriptome and coding capacity of a nidovirus
- (2017) Han Di et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Regulation of Stress Responses and Translational Control by Coronavirus
- (2016) To Fung et al. Viruses-Basel
- High-Resolution Analysis of Coronavirus Gene Expression by RNA Sequencing and Ribosome Profiling
- (2016) Nerea Irigoyen et al. PLoS Pathogens
- Continuous and Discontinuous RNA Synthesis in Coronaviruses
- (2015) Isabel Sola et al. Annual Review of Virology
- Accessory proteins of SARS-CoV and other coronaviruses
- (2014) Ding Xiang Liu et al. ANTIVIRAL RESEARCH
- Study of the HIV-2 Env Cytoplasmic Tail Variability and Its Impact on Tat, Rev and Nef
- (2013) Nordine Bakouche et al. PLoS One
- Non-canonical translation in RNA viruses
- (2012) A. E. Firth et al. JOURNAL OF GENERAL VIROLOGY
- Bat severe acute respiratory syndrome-like coronavirus ORF3b homologues display different interferon antagonist activities
- (2011) P. Zhou et al. JOURNAL OF GENERAL VIROLOGY
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