scAPAdb: a comprehensive database of alternative polyadenylation at single-cell resolution
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
scAPAdb: a comprehensive database of alternative polyadenylation at single-cell resolution
Authors
Keywords
-
Journal
NUCLEIC ACIDS RESEARCH
Volume -, Issue -, Pages -
Publisher
Oxford University Press (OUP)
Online
2021-09-08
DOI
10.1093/nar/gkab795
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Analysis of alternative polyadenylation from single-cell RNA-seq using scDaPars reveals cell subpopulations invisible to gene expression
- (2021) Yipeng Gao et al. GENOME RESEARCH
- Gene expression dynamics are a proxy for selective pressures on alternatively polyadenylated isoforms
- (2020) Michal Levin et al. NUCLEIC ACIDS RESEARCH
- Widespread transcript shortening through alternative polyadenylation in secretory cell differentiation
- (2020) Larry C. Cheng et al. Nature Communications
- TREND-DB—a transcriptome-wide atlas of the dynamic landscape of alternative polyadenylation
- (2020) Federico Marini et al. NUCLEIC ACIDS RESEARCH
- Animal-APAdb: a comprehensive animal alternative polyadenylation database
- (2020) Weiwei Jin et al. NUCLEIC ACIDS RESEARCH
- movAPA: modeling and visualization of dynamics of alternative polyadenylation across biological samples
- (2020) Wenbin Ye et al. BIOINFORMATICS
- Role of alternative polyadenylation dynamics in acute myeloid leukaemia at single-cell resolution
- (2019) Congting Ye et al. RNA Biology
- Alternative cleavage and polyadenylation in health and disease
- (2019) Andreas J. Gruber et al. NATURE REVIEWS GENETICS
- Cell-type-specific analysis of alternative polyadenylation using single-cell transcriptomics data
- (2019) Eldad David Shulman et al. NUCLEIC ACIDS RESEARCH
- APAatlas: decoding alternative polyadenylation across human tissues
- (2019) Wei Hong et al. NUCLEIC ACIDS RESEARCH
- PlantAPAdb: a comprehensive database for alternative polyadenylation sites in plants
- (2019) Sheng Zhu et al. PLANT PHYSIOLOGY
- Comparative Analysis of Single-Cell RNA Sequencing Methods
- (2017) Christoph Ziegenhain et al. MOLECULAR CELL
- PolyA_DB 3 catalogs cleavage and polyadenylation sites identified by deep sequencing in multiple genomes
- (2017) Ruijia Wang et al. NUCLEIC ACIDS RESEARCH
- OUP accepted manuscript
- (2017) NUCLEIC ACIDS RESEARCH
- Massively parallel digital transcriptional profiling of single cells
- (2017) Grace X. Y. Zheng et al. Nature Communications
- Alternative polyadenylation of mRNA precursors
- (2016) Bin Tian et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
- (2015) Evan Z. Macosko et al. CELL
- Genome-wide identification and predictive modeling of polyadenylation sites in eukaryotes
- (2014) G. Ji et al. BRIEFINGS IN BIOINFORMATICS
- APASdb: a database describing alternative poly(A) sites and selection of heterogeneous cleavage sites downstream of poly(A) signals
- (2014) Leiming You et al. NUCLEIC ACIDS RESEARCH
- Dynamic analyses of alternative polyadenylation from RNA-seq reveal a 3′-UTR landscape across seven tumour types
- (2014) Zheng Xia et al. Nature Communications
- APADB: a database for alternative polyadenylation and microRNA regulation events
- (2014) S. Muller et al. Database-The Journal of Biological Databases and Curation
- Alternative cleavage and polyadenylation: the long and short of it
- (2013) Bin Tian et al. TRENDS IN BIOCHEMICAL SCIENCES
- Short Communication Expression of splice variants of cancer-testis genes ODF3 and ODF4 in the testis of a prostate cancer patient
- (2012) S. Ghafouri-Fard et al. GENETICS AND MOLECULAR RESEARCH
- CEL-Seq: Single-Cell RNA-Seq by Multiplexed Linear Amplification
- (2012) Tamar Hashimshony et al. Cell Reports
- DREME: motif discovery in transcription factor ChIP-seq data
- (2011) Timothy L. Bailey BIOINFORMATICS
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started