Widespread transcript shortening through alternative polyadenylation in secretory cell differentiation
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Widespread transcript shortening through alternative polyadenylation in secretory cell differentiation
Authors
Keywords
-
Journal
Nature Communications
Volume 11, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-06-23
DOI
10.1038/s41467-020-16959-2
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Regulation of Intronic Polyadenylation by PCF11 Impacts mRNA Expression of Long Genes
- (2019) Ruijia Wang et al. Cell Reports
- The mRNA Export Receptor NXF1 Coordinates Transcriptional Dynamics, Alternative Polyadenylation, and mRNA Export
- (2019) Suli Chen et al. MOLECULAR CELL
- RNA sequencing of the NCI-60: Integration into CellMiner and CellMiner CDB
- (2019) William C. Reinhold et al. CANCER RESEARCH
- Alternative cleavage and polyadenylation in health and disease
- (2019) Andreas J. Gruber et al. NATURE REVIEWS GENETICS
- New factors for protein transport identified by a genome-wide CRISPRi screen in mammalian cells
- (2019) Laia Bassaganyas et al. JOURNAL OF CELL BIOLOGY
- Pituitary cell translation and secretory capacities are enhanced cell autonomously by the transcription factor Creb3l2
- (2019) Konstantin Khetchoumian et al. Nature Communications
- Single-cell RNA sequencing reveals regulatory mechanism for trophoblast cell-fate divergence in human peri-implantation conceptuses
- (2019) Bo Lv et al. PLOS BIOLOGY
- Specification of trophoblast from embryonic stem cells exposed to BMP4†
- (2018) R Michael Roberts et al. BIOLOGY OF REPRODUCTION
- Derivation of Human Trophoblast Stem Cells
- (2018) Hiroaki Okae et al. Cell Stem Cell
- T Follicular Helper Cell-Germinal Center B Cell Interaction Strength Regulates Entry into Plasma Cell or Recycling Germinal Center Cell Fate
- (2018) Wataru Ise et al. IMMUNITY
- Integrating single-cell transcriptomic data across different conditions, technologies, and species
- (2018) Andrew Butler et al. NATURE BIOTECHNOLOGY
- RNA localization regulates diverse and dynamic cellular processes
- (2018) Pearl V. Ryder et al. TRAFFIC
- Widespread intronic polyadenylation diversifies immune cell transcriptomes
- (2018) Irtisha Singh et al. Nature Communications
- RNA-Seq identifies genes whose proteins are transformative in the differentiation of cytotrophoblast to syncytiotrophoblast, in human primary villous and BeWo trophoblasts
- (2018) Christopher Azar et al. Scientific Reports
- Single-cell RNA-seq reveals the diversity of trophoblast subtypes and patterns of differentiation in the human placenta
- (2018) Yawei Liu et al. CELL RESEARCH
- Single-cell reconstruction of the early maternal–fetal interface in humans
- (2018) Roser Vento-Tormo et al. NATURE
- PolyA_DB 3 catalogs cleavage and polyadenylation sites identified by deep sequencing in multiple genomes
- (2017) Ruijia Wang et al. NUCLEIC ACIDS RESEARCH
- Integrative single-cell and cell-free plasma RNA transcriptomics elucidates placental cellular dynamics
- (2017) Jason C. H. Tsang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Regulating Secretory Proteostasis through the Unfolded Protein Response: From Function to Therapy
- (2017) Lars Plate et al. TRENDS IN CELL BIOLOGY
- Alternative polyadenylation of mRNA precursors
- (2016) Bin Tian et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Comparison of syncytiotrophoblast generated from human embryonic stem cells and from term placentas
- (2016) Shinichiro Yabe et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The endocrine function of human placenta: an overview
- (2016) Mariana A. Costa REPRODUCTIVE BIOMEDICINE ONLINE
- 3′READS+, a sensitive and accurate method for 3′ end sequencing of polyadenylated RNA
- (2016) Dinghai Zheng et al. RNA
- Transcriptional termination in mammals: Stopping the RNA polymerase II juggernaut
- (2016) N. J. Proudfoot SCIENCE
- Evolution and Biological Roles of Alternative 3′UTRs
- (2016) Christine Mayr TRENDS IN CELL BIOLOGY
- PAF Complex Plays Novel Subunit-Specific Roles in Alternative Cleavage and Polyadenylation
- (2016) Yan Yang et al. PLoS Genetics
- Placenta: The Forgotten Organ
- (2015) Emin Maltepe et al. Annual Review of Cell and Developmental Biology
- The end of the message: multiple protein–RNA interactions define the mRNA polyadenylation site
- (2015) Yongsheng Shi et al. GENES & DEVELOPMENT
- Transcriptional profiling of mouse B cell terminal differentiation defines a signature for antibody-secreting plasma cells
- (2015) Wei Shi et al. NATURE IMMUNOLOGY
- Diversity and selectivity in mRNA translation on the endoplasmic reticulum
- (2015) David W. Reid et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Systematic Profiling of Poly(A)+ Transcripts Modulated by Core 3’ End Processing and Splicing Factors Reveals Regulatory Rules of Alternative Cleavage and Polyadenylation
- (2015) Wencheng Li et al. PLoS Genetics
- Absence of BiP Co-chaperone DNAJC3 Causes Diabetes Mellitus and Multisystemic Neurodegeneration
- (2014) Matthis Synofzik et al. AMERICAN JOURNAL OF HUMAN GENETICS
- BMP4 regulation of human trophoblast development
- (2014) Yingchun Li et al. INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY
- The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
- (2014) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Transcriptional regulators of the trophoblast lineage in mammals with hemochorial placentation
- (2014) Jason G Knott et al. REPRODUCTION
- Epigenomic Analysis of Multilineage Differentiation of Human Embryonic Stem Cells
- (2013) Wei Xie et al. CELL
- Widespread and extensive lengthening of 3' UTRs in the mammalian brain
- (2013) P. Miura et al. GENOME RESEARCH
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- A quantitative atlas of polyadenylation in five mammals
- (2012) Adnan Derti et al. GENOME RESEARCH
- Analysis of alternative cleavage and polyadenylation by 3′ region extraction and deep sequencing
- (2012) Mainul Hoque et al. NATURE METHODS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq
- (2011) P. J. Shepard et al. RNA
- U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation
- (2010) Daisuke Kaida et al. NATURE
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- Widespread Shortening of 3′UTRs by Alternative Cleavage and Polyadenylation Activates Oncogenes in Cancer Cells
- (2009) Christine Mayr et al. CELL
- Reprogramming of 3′ Untranslated Regions of mRNAs by Alternative Polyadenylation in Generation of Pluripotent Stem Cells from Different Cell Types
- (2009) Zhe Ji et al. PLoS One
- Progressive lengthening of 3' untranslated regions of mRNAs by alternative polyadenylation during mouse embryonic development
- (2009) Z. Ji et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ras-MAPK signaling promotes trophectoderm formation from embryonic stem cells and mouse embryos
- (2008) Chi-Wei Lu et al. NATURE GENETICS
- Proliferating Cells Express mRNAs with Shortened 3' Untranslated Regions and Fewer MicroRNA Target Sites
- (2008) R. Sandberg et al. SCIENCE
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search