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Discovery of 20 novel ribosomal leader candidates in bacteria and archaea

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Small circRNAs with self-cleaving ribozymes are highly expressed in diverse metazoan transcriptomes

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Doubling of the known set of RNA viruses by metagenomic analysis of an aquatic virome

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Novel ribozymes: discovery, catalytic mechanisms, and the quest to understand biological function

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Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil

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OUP accepted manuscript

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Structural and Biochemical Properties of Novel Self-Cleaving Ribozymes

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Virus taxonomy: the database of the International Committee on Taxonomy of Viruses (ICTV)

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(2017) Ioanna Kalvari et al.   NUCLEIC ACIDS RESEARCH

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A statistical test for conserved RNA structure shows lack of evidence for structure in lncRNAs

(2016) Elena Rivas et al.   NATURE METHODS

Ligand-dependent ribozymes

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Microbial activity in forest soil reflects the changes in ecosystem properties between summer and winter

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New classes of self-cleaving ribozymes revealed by comparative genomics analysis

(2015) Zasha Weinberg et al.   Nature Chemical Biology

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

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Chemistry and Biology of Self-Cleaving Ribozymes

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Unprecedented genomic diversity of RNA viruses in arthropods reveals the ancestry of negative-sense RNA viruses

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CDD: NCBI's conserved domain database

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Hundreds of Circular Novel Plasmids and DNA Elements Identified in a Rat Cecum Metamobilome

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The new frontier of genome engineering with CRISPR-Cas9

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Gene regulation by structured mRNA elements

(2014) Andreas Wachter   TRENDS IN GENETICS

Infernal 1.1: 100-fold faster RNA homology searches

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General Acid–Base Catalysis Mediated by Nucleobases in the Hairpin Ribozyme

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Sequence elements outside the catalytic core of natural hairpin ribozymes modulate the reactions differentially

(2011) Preeti Bajaj et al.   BIOLOGICAL CHEMISTRY

RNAcode: Robust discrimination of coding and noncoding regions in comparative sequence data

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Regulation of mRNA Translation and Stability by microRNAs

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Regulatory RNAs in Bacteria

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Modulating RNA structure and catalysis: lessons from small cleaving ribozymes

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Analysis of Four-Way Junctions in RNA Structures

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What recent ribosome structures have revealed about the mechanism of translation

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DARN! A Weighted Constraint Solver for RNA Motif Localization

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A structural understanding of the dynamic ribosome machine

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