Discovery of 20 novel ribosomal leader candidates in bacteria and archaea

It's all about the T: transcription termination in archaea

(2019) Lisa-Katharina Maier et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Key Concepts and Challenges in Archaeal Transcription

(2019) Fabian Blombach et al.   JOURNAL OF MOLECULAR BIOLOGY

Pervasive Regulatory Functions of mRNA Structure Revealed by High-Resolution SHAPE Probing

(2018) Anthony M. Mustoe et al.   CELL

An Archaeal Fluoride-Responsive Riboswitch Provides an Inducible Expression System for Hyperthermophiles

(2018) Michael Clayton Speed et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

OUP accepted manuscript

(2018)   NUCLEIC ACIDS RESEARCH

Ribosomal protein L31 in Escherichia coli contributes to ribosome subunit association and translation, whereas short L31 cleaved by protease 7 reduces both activities

(2017) Masami Ueta et al.   GENES TO CELLS

Structural and Biochemical Properties of Novel Self-Cleaving Ribozymes

(2017) et al.   MOLECULES

Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions

(2017) Zasha Weinberg et al.   NUCLEIC ACIDS RESEARCH

Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families

(2017) Ioanna Kalvari et al.   NUCLEIC ACIDS RESEARCH

Riboswitch diversity and distribution

(2017) Phillip J. McCown et al.   RNA

Modular Assembly of the Bacterial Large Ribosomal Subunit

(2016) Joseph H. Davis et al.   CELL

Regulation of Ribosomal Protein OperonsrplM-rpsI,rpmB-rpmG, andrplU-rpmAat the Transcriptional and Translational Levels

(2016) Leonid V. Aseev et al.   JOURNAL OF BACTERIOLOGY

Intersubunit Bridges of the Bacterial Ribosome

(2016) Qi Liu et al.   JOURNAL OF MOLECULAR BIOLOGY

A statistical test for conserved RNA structure shows lack of evidence for structure in lncRNAs

(2016) Elena Rivas et al.   NATURE METHODS

Structure of the E. coli ribosome–EF-Tu complex at

(2015) Niels Fischer et al.   NATURE

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

(2015) Nuala A. O'Leary et al.   NUCLEIC ACIDS RESEARCH

Regulation of therplYgene encoding 5S rRNA binding protein L25 inEscherichia coliand related bacteria

(2015) Leonid V. Aseev et al.   RNA

Co-evolution of Bacterial Ribosomal Protein S15 with Diverse mRNA Regulatory Structures

(2015) Betty L. Slinger et al.   PLoS Genetics

Discovery and validation of novel and distinct RNA regulators for ribosomal protein S15 in diverse bacterial phyla

(2014) Betty L Slinger et al.   BMC GENOMICS

Infernal 1.1: 100-fold faster RNA homology searches

(2013) E. P. Nawrocki et al.   BIOINFORMATICS

Most RNAs regulating ribosomal protein biosynthesis in Escherichia coli are narrowly distributed to Gammaproteobacteria

(2013) Yang Fu et al.   NUCLEIC ACIDS RESEARCH

RNA at 92°C

(2013) Claire Toffano-Nioche et al.   RNA Biology

RNA structures regulating ribosomal protein biosynthesis in bacilli

(2013) Kaila Deiorio-Haggar et al.   RNA Biology

Bacterial RNA motif in the 5' UTR of rpsF interacts with an S6:S18 complex

(2013) Y. Fu et al.   RNA

S6:S18 ribosomal protein complex interacts with a structural motif present in its own mRNA

(2013) D. Matelska et al.   RNA

GenBank

(2012) Dennis A. Benson et al.   NUCLEIC ACIDS RESEARCH

R2R - software to speed the depiction of aesthetic consensus RNA secondary structures

(2011) Zasha Weinberg et al.   BMC BIOINFORMATICS

Discriminatory power of RNA family models

(2010) C. H. z. Siederdissen et al.   BIOINFORMATICS

Visualizing Ribosome Biogenesis: Parallel Assembly Pathways for the 30SSubunit

(2010) Anke M. Mulder et al.   SCIENCE

Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes

(2010) Zasha Weinberg et al.   GENOME BIOLOGY

What recent ribosome structures have revealed about the mechanism of translation

(2009) T. Martin Schmeing et al.   NATURE

A structural understanding of the dynamic ribosome machine

(2008) Thomas A. Steitz   NATURE REVIEWS MOLECULAR CELL BIOLOGY