Localization atomic force microscopy

A CLC-ec1 mutant reveals global conformational change and suggests a unifying mechanism for the CLC Cl–/H+ transport cycle

(2020) Tanmay S Chavan et al.   eLife

Conformation space of a heterodimeric ABC exporter under turnover conditions

(2019) Susanne Hofmann et al.   NATURE

Advances in high-speed atomic force microscopy (HS-AFM) reveal dynamics of transmembrane channels and transporters

(2019) George R Heath et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Force-induced conformational changes in PIEZO1

(2019) Yi-Chih Lin et al.   NATURE

High-speed photothermal off-resonance atomic force microscopy reveals assembly routes of centriolar scaffold protein SAS-6

(2018) Adrian P. Nievergelt et al.   Nature Nanotechnology

CLC Chloride Channels and Transporters: Structure, Function, Physiology, and Disease

(2018) Thomas J. Jentsch et al.   PHYSIOLOGICAL REVIEWS

Structural titration of receptor ion channel GLIC gating by HS-AFM

(2018) Yi Ruan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A novel phase-shift-based amplitude detector for a high-speed atomic force microscope

(2018) Atsushi Miyagi et al.   REVIEW OF SCIENTIFIC INSTRUMENTS

An iris diaphragm mechanism to gate a cyclic nucleotide-gated ion channel

(2018) Arin Marchesi et al.   Nature Communications

Atomic- and Molecular-Resolution Mapping of Solid–Liquid Interfaces by 3D Atomic Force Microscopy

(2018) Takeshi Fukuma et al.   ACS Nano

High-speed AFM height spectroscopy reveals µs-dynamics of unlabeled biomolecules

(2018) George R. Heath et al.   Nature Communications

Direct visualization of glutamate transporter elevator mechanism by high-speed AFM

(2017) Yi Ruan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High-speed atomic force microscopy shows that annexin V stabilizes membranes on the second timescale

(2016) Atsushi Miyagi et al.   Nature Nanotechnology

Condensin Smc2-Smc4 Dimers Are Flexible and Dynamic

(2016) Jorine M. Eeftens et al.   Cell Reports

The dimerization equilibrium of a ClC Cl−/H+ antiporter in lipid bilayers

(2016) Rahul Chadda et al.   eLife

Revealing an outward-facing open conformational state in a CLC Cl–/H+ exchange transporter

(2016) Chandra M Khantwal et al.   eLife

Spontaneous Inward Opening of the Dopamine Transporter Is Triggered by PIP2-Regulated Dynamics of the N-Terminus

(2015) George Khelashvili et al.   ACS Chemical Neuroscience

13C NMR detects conformational change in the 100-kD membrane transporter ClC-ec1

(2015) Sherwin J. Abraham et al.   JOURNAL OF BIOMOLECULAR NMR

Semi-automated selection of cryo-EM particles in RELION-1.3

(2015) Sjors H.W. Scheres   JOURNAL OF STRUCTURAL BIOLOGY

High-Speed AFM Images of Thermal Motion Provide Stiffness Map of Interfacial Membrane Protein Moieties

(2014) Johannes Preiner et al.   NANO LETTERS

Fluorophore localization algorithms for super-resolution microscopy

(2014) Alex Small et al.   NATURE METHODS

Conformational changes required for H+/Cl− exchange mediated by a CLC transporter

(2014) Daniel Basilio et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Measuring image resolution in optical nanoscopy

(2013) Robert P J Nieuwenhuizen et al.   NATURE METHODS

X-ray structures of LeuT in substrate-free outward-open and apo inward-open states

(2012) Harini Krishnamurthy et al.   NATURE

PROPKA3: Consistent Treatment of Internal and Surface Residues in Empirical pKaPredictions

(2011) Mats H. M. Olsson et al.   Journal of Chemical Theory and Computation

Antiport Mechanism for Cl−/H+ in ClC-ec1 from Normal-Mode Analysis

(2010) Gennady V. Miloshevsky et al.   BIOPHYSICAL JOURNAL

Video imaging of walking myosin V by high-speed atomic force microscopy

(2010) Noriyuki Kodera et al.   NATURE

Structural Information, Resolution, and Noise in High-Resolution Atomic Force Microscopy Topographs

(2009) Peter Fechner et al.   BIOPHYSICAL JOURNAL

CHARMM-GUI Membrane Builder for Mixed Bilayers and Its Application to Yeast Membranes

(2009) Sunhwan Jo et al.   BIOPHYSICAL JOURNAL

ACEMD: Accelerating Biomolecular Dynamics in the Microsecond Time Scale

(2009) M. J. Harvey et al.   Journal of Chemical Theory and Computation

Transport mechanism of a bacterial homologue of glutamate transporters

(2009) Nicolas Reyes et al.   NATURE

Atomic and subnanometer resolution in ambient conditions by atomic force microscopy

(2009) Yang Gan   SURFACE SCIENCE REPORTS

Insights into the ClC-4 Transport Mechanism from Studies of Zn2+ Inhibition

(2008) Jeremiah D. Osteen et al.   BIOPHYSICAL JOURNAL