Reinventing the wheel? Reassessing the roles of gene flow, sorting and convergence in repeated evolution

Anomalous collapses of Nares Strait ice arches leads to enhanced export of Arctic sea ice

(2021) G. W. K. Moore et al.   Nature Communications

Million-year-old DNA sheds light on the genomic history of mammoths

(2021) Tom van der Valk et al.   NATURE

How many genetic changes create new species?

(2021) Patrik Nosil et al.   SCIENCE

Genome sequences reveal global dispersal routes and suggest convergent genetic adaptations in seahorse evolution

(2021) Chunyan Li et al.   Nature Communications

Genomic basis of parallel adaptation varies with divergence in Arabidopsis and its relatives

(2021) Magdalena Bohutínská et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dispersal Reduction: Causes, Genomic Mechanisms, and Evolutionary Consequences

(2020) J.M. Waters et al.   TRENDS IN ECOLOGY & EVOLUTION

Modular chromosome rearrangements reveal parallel and nonparallel adaptation in a marine fish

(2020) Tony Kess et al.   Ecology and Evolution

Adaptive convergence at the genomic level – Prevalent, uncommon or very rare?

(2020) Ziwen He et al.   National Science Review

Shared ancestral polymorphisms and chromosomal rearrangements as potential drivers of local adaptation in a marine fish

(2020) Hugo Cayuela et al.   MOLECULAR ECOLOGY

Massive haplotypes underlie ecotypic differentiation in sunflowers

(2020) Marco Todesco et al.   NATURE

Convergent evolution of conserved mitochondrial pathways underlies repeated adaptation to extreme environments

(2020) Ryan Greenway et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Perfect mimicry between Heliconius butterflies is constrained by genetics and development

(2020) Steven M. Van Belleghem et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

On the causes of geographically heterogeneous parallel evolution in sticklebacks

(2020) Bohao Fang et al.   Nature Ecology & Evolution

Limited genetic parallels underlie convergent evolution of quantitative pattern variation in mimetic butterflies

(2020) Hannah E. Bainbridge et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Different sources of allelic variation drove repeated color pattern divergence in cichlid fishes

(2020) Sabine Urban et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic basis of the loss of diadromy in Galaxias maculatus : insights from reciprocal transplant experiments

(2020) M. Lisette Delgado et al.   MOLECULAR ECOLOGY

The genomic signature of ecological divergence along the benthic‐limnetic axis in allopatric and sympatric threespine stickleback

(2020) Andreas Härer et al.   MOLECULAR ECOLOGY

Genomics Reveals Widespread Ecological Speciation in Flightless Insects

(2020) Graham A McCulloch et al.   SYSTEMATIC BIOLOGY

Intercontinental genomic parallelism in multiple three-spined stickleback adaptive radiations

(2020) Isabel S. Magalhaes et al.   Nature Ecology & Evolution

Standing genetic variation as the predominant source for adaptation of a songbird

(2019) Yu-Ting Lai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Retention of a chromosomal inversion from an anadromous ancestor provides the genetic basis for alternative freshwater ecotypes in rainbow trout

(2019) Martin C. Arostegui et al.   MOLECULAR ECOLOGY

Gradual evolution towards flightlessness in steamer ducks

(2019) Leonardo Campagna et al.   EVOLUTION

Parallel evolution of an alpine type ecomorph in a scorpionfly: Independent adaptation to high‐altitude environments in multiple mountain locations

(2019) Tomoya Suzuki et al.   MOLECULAR ECOLOGY

Ecological gradients drive insect wing loss and speciation: The role of the alpine treeline

(2019) Graham A. McCulloch et al.   MOLECULAR ECOLOGY

Convergent evolution in the genomics era: new insights and directions

(2019) Timothy B. Sackton et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Population genomics perspectives on convergent adaptation

(2019) Kristin M. Lee et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Local ancestry analysis reveals genomic convergence in extremophile fishes

(2019) Anthony P. Brown et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Convergent genomic signatures of flight loss in birds suggest a switch of main fuel

(2019) Shengkai Pan et al.   Nature Communications

Recurrent convergent evolution at amino acid residue 261 in fish rhodopsin

(2019) Jason Hill et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The effects of diadromy and its loss on genomic divergence: The case of amphidromous Galaxias maculatus populations

(2019) M. Lisette Delgado et al.   MOLECULAR ECOLOGY

Introgression drives repeated evolution of winter coat color polymorphism in hares

(2019) Iwona Giska et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Parallel evolution of ancient, pleiotropic enhancers underlies butterfly wing pattern mimicry

(2019) James J. Lewis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interplay between Developmental Flexibility and Determinism in the Evolution of Mimetic Heliconius Wing Patterns

(2019) Carolina Concha et al.   CURRENT BIOLOGY

Ancestral Hybridization Facilitated Species Diversification in the Lake Malawi Cichlid Fish Adaptive Radiation

(2019) Hannes Svardal et al.   MOLECULAR BIOLOGY AND EVOLUTION

Cavefishes

(2018) Richard Borowsky   CURRENT BIOLOGY

Mc1r gene in Astroblepus pholeter and Astyanax mexicanus : Convergent regressive evolution of pigmentation across cavefish species

(2018) Luis Espinasa et al.   DEVELOPMENTAL BIOLOGY

Repeated Selection of Alternatively Adapted Haplotypes Creates Sweeping Genomic Remodeling in Stickleback

(2018) Susan Bassham et al.   GENETICS

Variant Linkage Analysis Usingde NovoTranscriptome Sequencing Identifies a Conserved Phosphine Resistance Gene in Insects

(2018) David I. Schlipalius et al.   GENETICS

Common Genetic Basis of Eye and Pigment Loss in Two Distinct Cave Populations of the Isopod Crustacean Asellus aquaticus

(2018) Cassandra Re et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Genomic signatures of fine-scale local selection in Atlantic salmon suggest involvement of sexual maturation, energy homeostasis and immune defence-related genes

(2018) Victoria L. Pritchard et al.   MOLECULAR ECOLOGY

Parallel Evolution of Common Allelic Variants Confers Flowering Diversity inCapsella rubella

(2018) Li Yang et al.   PLANT CELL

Is evolution predictable?

(2018) David Reznick et al.   SCIENCE

Natural selection and the predictability of evolution inTimemastick insects

(2018) Patrik Nosil et al.   SCIENCE

The Missing Response to Selection in the Wild

(2018) Benoit Pujol et al.   TRENDS IN ECOLOGY & EVOLUTION

Eco-Evolutionary Genomics of Chromosomal Inversions

(2018) Maren Wellenreuther et al.   TRENDS IN ECOLOGY & EVOLUTION

Convergent evolution of gene expression in two high-toothed stickleback populations

(2018) James C. Hart et al.   PLoS Genetics

Repeated Selection of Alternatively Adapted Haplotypes Creates Sweeping Genomic Remodeling in Stickleback

(2018) Susan Bassham et al.   GENETICS

Variant Linkage Analysis Usingde NovoTranscriptome Sequencing Identifies a Conserved Phosphine Resistance Gene in Insects

(2018) David I. Schlipalius et al.   GENETICS

(Non)Parallel Evolution

(2018) Daniel I. Bolnick et al.   Annual Review of Ecology Evolution and Systematics

Stepwise cis-Regulatory Changes in ZCN8 Contribute to Maize Flowering-Time Adaptation

(2018) Li Guo et al.   CURRENT BIOLOGY

The role of gene flow in rapid and repeated evolution of cave related traits in Mexican tetra, Astyanax mexicanus

(2018) Adam Herman et al.   MOLECULAR ECOLOGY

Contingency and determinism in evolution: Replaying life’s tape

(2018) Zachary D. Blount et al.   SCIENCE

Evolution at two time frames: Polymorphisms from an ancient singular divergence event fuel contemporary parallel evolution

(2018) Steven M. Van Belleghem et al.   PLoS Genetics

Genomic Changes Associated with Reproductive and Migratory Ecotypes in Sockeye Salmon (Oncorhynchus nerka)

(2017) Andrew J. Veale et al.   Genome Biology and Evolution

A test of genomic modularity among life-history adaptations promoting speciation with gene flow

(2017) Gregory J. Ragland et al.   MOLECULAR ECOLOGY

Genomic clustering of adaptive loci during parallel evolution of an Australian wildflower

(2017) Federico Roda et al.   MOLECULAR ECOLOGY

Long-term balancing selection on chromosomal variants associated with crypsis in a stick insect

(2017) Dorothea Lindtke et al.   MOLECULAR ECOLOGY

Comparative genomics reveals convergent evolution between the bamboo-eating giant and red pandas

(2017) Yibo Hu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient hybridization fuels rapid cichlid fish adaptive radiations

(2017) Joana I. Meier et al.   Nature Communications

Complex modular architecture around a simple toolkit of wing pattern genes

(2017) Steven M. Van Belleghem et al.   Nature Ecology & Evolution

Predicting evolution

(2017) Michael Lässig et al.   Nature Ecology & Evolution

Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory

(2017) Kenji Fukushima et al.   Nature Ecology & Evolution

The genomic landscape of rapid repeated evolutionary adaptation to toxic pollution in wild fish

(2016) N. M. Reid et al.   SCIENCE

Recombination Rate Evolution and the Origin of Species

(2016) Daniel Ortiz-Barrientos et al.   TRENDS IN ECOLOGY & EVOLUTION

The Role of Standing Variation in Geographic Convergent Adaptation

(2015) Peter L. Ralph et al.   AMERICAN NATURALIST

Adaptive divergence in the monkey flower Mimulus guttatus is maintained by a chromosomal inversion

(2015) Alex D. Twyford et al.   EVOLUTION

Convergent evolution of the genomes of marine mammals

(2015) Andrew D Foote et al.   NATURE GENETICS

Evolution of stickleback in 50 years on earthquake-uplifted islands

(2015) Emily A. Lescak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Melanocortin 4 receptor mutations contribute to the adaptation of cavefish to nutrient-poor conditions

(2015) Ariel C. Aspiras et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

What does convergent evolution mean? The interpretation of convergence and its implications in the search for limits to evolution

(2015) C. Tristan Stayton   Interface Focus

Convergent Evolution During Local Adaptation to Patchy Landscapes

(2015) Peter L. Ralph et al.   PLoS Genetics

Supergenes and their role in evolution

(2014) M J Thompson et al.   HEREDITY

The genomic substrate for adaptive radiation in African cichlid fish

(2014) David Brawand et al.   NATURE

Convergent evolution and adaptation of Pseudomonas aeruginosa within patients with cystic fibrosis

(2014) Rasmus Lykke Marvig et al.   NATURE GENETICS

Stick Insect Genomes Reveal Natural Selection's Role in Parallel Speciation

(2014) V. Soria-Carrasco et al.   SCIENCE

Ancient homology underlies adaptive mimetic diversity across butterflies

(2014) Jason R. Gallant et al.   Nature Communications

Fast Evolution from Precast Bricks: Genomics of Young Freshwater Populations of Threespine Stickleback Gasterosteus aculeatus

(2014) Nadezhda V. Terekhanova et al.   PLoS Genetics

THE LOCI OF REPEATED EVOLUTION: A CATALOG OF GENETIC HOTSPOTS OF PHENOTYPIC VARIATION

(2013) Arnaud Martin et al.   EVOLUTION

Genome dynamics during experimental evolution

(2013) Jeffrey E. Barrick et al.   NATURE REVIEWS GENETICS

The genetic causes of convergent evolution

(2013) David L. Stern   NATURE REVIEWS GENETICS

Identification of another module involved in the horizontal transfer of the Haemophilus genomic island ICEHin1056

(2013) Mario Juhas et al.   PLASMID

Genomic rearrangements and the evolution of clusters of locally adaptive loci

(2013) S. Yeaman   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

The probability of genetic parallelism and convergence in natural populations

(2012) G. L. Conte et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A Core Metabolic Enzyme Mediates Resistance to Phosphine Gas

(2012) D. I. Schlipalius et al.   SCIENCE

The Molecular Diversity of Adaptive Convergence

(2012) O. Tenaillon et al.   SCIENCE

CONVERGENCE, ADAPTATION, AND CONSTRAINT

(2011) Jonathan B. Losos   EVOLUTION

Ecological and Biomechanical Insights into the Evolution of Gliding in Mammals

(2011) Greg Byrnes et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Gene Loss and Parallel Evolution Contribute to Species Difference in Flower Color

(2011) S. D. Smith et al.   MOLECULAR BIOLOGY AND EVOLUTION

Adaptation in the age of ecological genomics: insights from parallelism and convergence

(2011) Kathryn R. Elmer et al.   TRENDS IN ECOLOGY & EVOLUTION

Evolution in caves: Darwin’s ‘wrecks of ancient life’ in the molecular era

(2010) CARLOS JUAN et al.   MOLECULAR ECOLOGY

Molecular and functional basis of phenotypic convergence in white lizards at White Sands

(2009) E. B. Rosenblum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetics and ecological speciation

(2009) D. Schluter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sexual Conflict Resolved by Invasion of a Novel Sex Determiner in Lake Malawi Cichlid Fishes

(2009) R. B. Roberts et al.   SCIENCE

Convergence and parallelism reconsidered: what have we learned about the genetics of adaptation?

(2007) J ARENDT et al.   TRENDS IN ECOLOGY & EVOLUTION

Adaptation from standing genetic variation

(2007) R BARRETT et al.   TRENDS IN ECOLOGY & EVOLUTION