Degradation of biological macromolecules supports uncultured microbial populations in Guaymas Basin hydrothermal sediments
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Title
Degradation of biological macromolecules supports uncultured microbial populations in Guaymas Basin hydrothermal sediments
Authors
Keywords
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Journal
ISME Journal
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-06-11
DOI
10.1038/s41396-021-01026-5
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Note: Only part of the references are listed.- Microbial Communities Under Distinct Thermal and Geochemical Regimes in Axial and Off-Axis Sediments of Guaymas Basin
- (2021) Andreas Teske et al. Frontiers in Microbiology
- The Biogeochemistry of Marine Polysaccharides: Sources, Inventories, and Bacterial Drivers of the Carbohydrate Cycle
- (2020) C. Arnosti et al. Annual Review of Marine Science
- DRAM for distilling microbial metabolism to automate the curation of microbiome function
- (2020) Michael Shaffer et al. NUCLEIC ACIDS RESEARCH
- Biochemical unity revisited: microbial central carbon metabolism holds new discoveries, multi-tasking pathways, and redundancies with a reason
- (2020) Lennart Schada von Borzyskowski et al. BIOLOGICAL CHEMISTRY
- Highly enriched N‐containing organic molecules of Synechococcus lysates and their rapid transformation by heterotrophic bacteria
- (2020) Qiang Zheng et al. LIMNOLOGY AND OCEANOGRAPHY
- Innovations to culturing the uncultured microbial majority
- (2020) William H. Lewis et al. NATURE REVIEWS MICROBIOLOGY
- Anaerobic bacterial degradation of protein and lipid macromolecules in subarctic marine sediment
- (2020) Claus Pelikan et al. ISME Journal
- Complex subsurface hydrothermal fluid mixing at a submarine arc volcano supports distinct and highly diverse microbial communities
- (2020) Anna-Louise Reysenbach et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Fractionation of Arthrospira platensis (Spirulina) water soluble proteins by membrane diafiltration
- (2020) Rafik Balti et al. SEPARATION AND PURIFICATION TECHNOLOGY
- Distributions of Extracellular Peptidases Across Prokaryotic Genomes Reflect Phylogeny and Habitat
- (2019) Trang T. H. Nguyen et al. Frontiers in Microbiology
- A thraustochytrid-specific lipase/phospholipase with unique positional specificity contributes to microbial competition and fatty acid acquisition from the environment
- (2019) Yohei Ishibashi et al. Scientific Reports
- Sediment cooling triggers germination and sulfate reduction by heat‐resistant thermophilic spore‐forming bacteria
- (2019) Emma Bell et al. ENVIRONMENTAL MICROBIOLOGY
- Phytoplankton-derived polysaccharides in the marine environment and their interactions with heterotrophic bacteria
- (2018) Marco Mühlenbruch et al. ENVIRONMENTAL MICROBIOLOGY
- Thermophilic endospores associated with migrated thermogenic hydrocarbons in deep Gulf of Mexico marine sediments
- (2018) Anirban Chakraborty et al. ISME Journal
- Effects of pressure, methane concentration, sulfate reduction activity, and temperature on methane production in surface sediments of the Gulf of Mexico
- (2018) Guang-Chao Zhuang et al. LIMNOLOGY AND OCEANOGRAPHY
- Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface
- (2018) Alexander J. Probst et al. Nature Microbiology
- In situ development of a methanotrophic microbiome in deep-sea sediments
- (2018) S. E. Ruff et al. ISME Journal
- Characterization of ExeM, an Extracellular Nuclease of Shewanella oneidensis MR-1
- (2018) Lucas Binnenkade et al. Frontiers in Microbiology
- MetaWRAP—a flexible pipeline for genome-resolved metagenomic data analysis
- (2018) Gherman V. Uritskiy et al. Microbiome
- Expansive microbial metabolic versatility and biodiversity in dynamic Guaymas Basin hydrothermal sediments
- (2018) Nina Dombrowski et al. Nature Communications
- Metagenomics Reveals Microbial Diversity and Metabolic Potentials of Seawater and Surface Sediment From a Hadal Biosphere at the Yap Trench
- (2018) Xinxu Zhang et al. Frontiers in Microbiology
- Metabolic potential and in situ activity of marine Marinimicrobia bacteria in an anoxic water column
- (2017) Anthony D. Bertagnolli et al. ENVIRONMENTAL MICROBIOLOGY
- Transient exposure to oxygen or nitrate reveals ecophysiology of fermentative and sulfate-reducing benthic microbial populations
- (2017) Sainab Saad et al. ENVIRONMENTAL MICROBIOLOGY
- Polysaccharide Utilization Loci: Fueling Microbial Communities
- (2017) Julie M. Grondin et al. JOURNAL OF BACTERIOLOGY
- Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
- (2017) Robert M Bowers et al. NATURE BIOTECHNOLOGY
- Salmon provides fast and bias-aware quantification of transcript expression
- (2017) Rob Patro et al. NATURE METHODS
- The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database
- (2017) Neil D Rawlings et al. NUCLEIC ACIDS RESEARCH
- Comparative metagenomics reveals insights into the deep-sea adaptation mechanism of the microorganisms in Iheya hydrothermal fields
- (2017) Hai-liang Wang et al. WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY
- Metabolic Roles of Uncultivated Bacterioplankton Lineages in the Northern Gulf of Mexico “Dead Zone”
- (2017) J. Cameron Thrash et al. mBio
- Diverse Marinimicrobia bacteria may mediate coupled biogeochemical cycles along eco-thermodynamic gradients
- (2017) Alyse K. Hawley et al. Nature Communications
- Complete genome sequence analysis of Archaeoglobus fulgidus strain 7324 (DSM 8774), a hyperthermophilic archaeal sulfate reducer from a North Sea oil field
- (2017) Nils-Kåre Birkeland et al. Standards in Genomic Sciences
- Genome-Centric Analysis of a Thermophilic and Cellulolytic Bacterial Consortium Derived from Composting
- (2017) Leandro N. Lemos et al. Frontiers in Microbiology
- Genomic insights into potential interdependencies in microbial hydrocarbon and nutrient cycling in hydrothermal sediments
- (2017) Nina Dombrowski et al. Microbiome
- Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
- (2017) Donovan H. Parks et al. Nature Microbiology
- Predicted microbial secretomes and their target substrates in marine sediment
- (2017) William D. Orsi et al. Nature Microbiology
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center
- (2016) Alice R. Wattam et al. NUCLEIC ACIDS RESEARCH
- Thermal and geochemical influences on microbial biogeography in the hydrothermal sediments of Guaymas Basin, Gulf of California
- (2016) Luke McKay et al. Environmental Microbiology Reports
- The Guaymas Basin Hiking Guide to Hydrothermal Mounds, Chimneys, and Microbial Mats: Complex Seafloor Expressions of Subsurface Hydrothermal Circulation
- (2016) Andreas Teske et al. Frontiers in Microbiology
- Microbial Communities in Methane- and Short Chain Alkane-Rich Hydrothermal Sediments of Guaymas Basin
- (2016) Frederick Dowell et al. Frontiers in Microbiology
- Hydrogen Limitation and Syntrophic Growth among Natural Assemblages of Thermophilic Methanogens at Deep-sea Hydrothermal Vents
- (2016) Begüm D. Topçuoğlu et al. Frontiers in Microbiology
- CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
- (2015) Donovan H. Parks et al. GENOME RESEARCH
- Global dispersion and local diversification of the methane seep microbiome
- (2015) S. Emil Ruff et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genomic and transcriptomic evidence for scavenging of diverse organic compounds by widespread deep-sea archaea
- (2015) Meng Li et al. Nature Communications
- The Fate of Marine Bacterial Exopolysaccharide in Natural Marine Microbial Communities
- (2015) Zilian Zhang et al. PLoS One
- Brevibacillus as a biological tool: a short review
- (2014) Amrita Kumari Panda et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Diversity of Methane-Cycling Archaea in Hydrothermal Sediment Investigated by General and Group-Specific PCR Primers
- (2014) Mark A. Lever et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Indications for algae-degrading benthic microbial communities in deep-sea sediments along the Antarctic Polar Front
- (2014) S. Emil Ruff et al. DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY
- Thermococcus paralvinellae sp. nov. and Thermococcus cleftensis sp. nov. of hyperthermophilic heterotrophs from deep-sea hydrothermal vents
- (2014) S. A. Hensley et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
- (2014) M. Kim et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Analysis, Optimization and Verification of Illumina-Generated 16S rRNA Gene Amplicon Surveys
- (2014) Michael C. Nelson et al. PLoS One
- Phylogenetic and Functional Diversity of Microbial Communities Associated with Subsurface Sediments of the Sonora Margin, Guaymas Basin
- (2014) Adrien Vigneron et al. PLoS One
- Identification of key components in the energy metabolism of the hyperthermophilic sulfate-reducing archaeon Archaeoglobus fulgidus by transcriptome analyses
- (2014) William P. Hocking et al. Frontiers in Microbiology
- Extracellular enzymes in terrestrial, freshwater, and marine environments: perspectives on system variability and common research needs
- (2013) C. Arnosti et al. BIOGEOCHEMISTRY
- Endospores of thermophilic bacteria as tracers of microbial dispersal by ocean currents
- (2013) Albert Leopold Müller et al. ISME Journal
- The carbohydrate-active enzymes database (CAZy) in 2013
- (2013) Vincent Lombard et al. NUCLEIC ACIDS RESEARCH
- Non-contiguous finished genome sequence and description of Brevibacillus massiliensis sp. nov.
- (2013) Perrine Hugon et al. Standards in Genomic Sciences
- Archaeal and bacterial diversity in an arsenic-rich shallow-sea hydrothermal system undergoing phase separation
- (2013) Roy E. Price et al. Frontiers in Microbiology
- Phosphatidylcholine biosynthesis and function in bacteria
- (2012) Otto Geiger et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia
- (2012) Manuel Martinez-Garcia et al. PLoS One
- Microbial control over carbon cycling in soil
- (2012) Joshua P. Schimel et al. Frontiers in Microbiology
- Quality control and preprocessing of metagenomic datasets
- (2011) R. Schmieder et al. BIOINFORMATICS
- Degradation of natural organic matter: A thermodynamic analysis
- (2011) Douglas E. LaRowe et al. GEOCHIMICA ET COSMOCHIMICA ACTA
- Anaerobic oxidation of methane at different temperature regimes in Guaymas Basin hydrothermal sediments
- (2011) Jennifer F Biddle et al. ISME Journal
- Influence of subsurface biosphere on geochemical fluxes from diffuse hydrothermal fluids
- (2011) Scott D. Wankel et al. Nature Geoscience
- PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
- (2010) Nancy Y. Yu et al. BIOINFORMATICS
- The genusThermotoga: recent developments
- (2010) Andrew D. Frock et al. ENVIRONMENTAL TECHNOLOGY
- A functional analysis of the pyrimidine catabolic pathway in Arabidopsis
- (2009) Rita Zrenner et al. NEW PHYTOLOGIST
- A Constant Flux of Diverse Thermophilic Bacteria into the Cold Arctic Seabed
- (2009) C. Hubert et al. SCIENCE
- Simultaneous Inference in General Parametric Models
- (2008) Torsten Hothorn et al. BIOMETRICAL JOURNAL
- Structure, Function, and Evolution of Bacterial ATP-Binding Cassette Systems
- (2008) A. L. Davidson et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
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