Microbial Chain Elongation and Subsequent Fermentation of Elongated Carboxylates as H2-Producing Processes for Sustained Reductive Dechlorination of Chlorinated Ethenes

Carboxylates and alcohols production in an autotrophic hydrogen‐based membrane biofilm reactor

(2021) Diana Carolina Calvo et al.   BIOTECHNOLOGY AND BIOENGINEERING

Chain elongators, friends, and foes

(2021) Pieter Candry et al.   CURRENT OPINION IN BIOTECHNOLOGY

The occurrence and ecology of microbial chain elongation of carboxylates in soils

(2021) Sayalee Joshi et al.   ISME Journal

Enrichment and characterisation of ethanol chain elongating communities from natural and engineered environments

(2020) Pieter Candry et al.   Scientific Reports

Ethanol:propionate ratio drives product selectivity in odd-chain elongation with Clostridium kluyveri and mixed communities

(2020) Pieter Candry et al.   BIORESOURCE TECHNOLOGY

Use of microbially desulfurized rubber to produce sustainable rubberized bitumen

(2020) Sk Faisal Kabir et al.   RESOURCES CONSERVATION AND RECYCLING

Medium Chain Carboxylic Acids from Complex Organic Feedstocks by Mixed Culture Fermentation

(2019) Vicky De Groof et al.   MOLECULES

Enhanced reductive dechlorination of trichloroethene in an acidic DNAPL impacted aquifer

(2019) Robert C. Borden et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Sustained Dechlorination of Vinyl Chloride to Ethene in Dehalococcoides-Enriched Cultures Grown without Addition of Exogenous Vitamins and at Low pH

(2019) Luz A. Puentes Jácome et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

A novel high-throughput method for kinetic characterisation of anaerobic bioproduction strains, applied to Clostridium kluyveri

(2018) Pieter Candry et al.   Scientific Reports

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

Higher Substrate Ratios of Ethanol to Acetate Steered Chain Elongation toward n-Caprylate in a Bioreactor with Product Extraction

(2018) Catherine M. Spirito et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Coupling Bioflocculation of Dehalococcoides mccartyi to High-Rate Reductive Dehalogenation of Chlorinated Ethenes

(2017) Anca G. Delgado et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Microbial degradation of chloroethenes: a review

(2017) Iva Dolinová et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Grape pomace compost harbors organohalide-respiring Dehalogenimonas species with novel reductive dehalogenase genes

(2017) Yi Yang et al.   ISME Journal

The functional potential and active populations of the pit mud microbiome for the production of Chinese strong-flavour liquor

(2017) Yong Tao et al.   Microbial Biotechnology

Product Diversity Linked to Substrate Usage in Chain Elongation by Mixed-Culture Fermentation

(2016) Marta Coma et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Chain Elongation with Reactor Microbiomes: Open-Culture Biotechnology To Produce Biochemicals

(2016) Largus T. Angenent et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Impact of Ammonium on Syntrophic Organohalide-Respiring and Fermenting Microbial Communities

(2016) Anca G. Delgado et al.   mSphere

The synthesis of n-caproate from lactate: a new efficient process for medium-chain carboxylates production

(2015) Xiaoyu Zhu et al.   Scientific Reports

Chain elongation in anaerobic reactor microbiomes to recover resources from waste

(2014) Catherine M Spirito et al.   CURRENT OPINION IN BIOTECHNOLOGY

Selective Enrichment Yields Robust Ethene-Producing Dechlorinating Cultures from Microcosms Stalled at cis-Dichloroethene

(2014) Anca G. Delgado et al.   PLoS One

Successful operation of continuous reactors at short retention times results in high-density, fast-rate Dehalococcoides dechlorinating cultures

(2013) Anca G. Delgado et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Linking thermodynamics and kinetics to assess pathway reversibility in anaerobic bioprocesses

(2013) Rebeca González-Cabaleiro et al.   Energy & Environmental Science

Enhanced Reductive Dechlorination of Tetrachloroethene Dense Nonaqueous Phase Liquid with EVO and Mg(OH)2

(2013) Kirsten M. Hiortdahl et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Desulfotomaculum spp. and related gram-positive sulfate-reducing bacteria in deep subsurface environments

(2013) Thomas Aüllo et al.   Frontiers in Microbiology

Using electron balances and molecular techniques to assess trichoroethene-induced shifts to a dechlorinating microbial community

(2012) Michal Ziv-El et al.   BIOTECHNOLOGY AND BIOENGINEERING

Managing methanogens and homoacetogens to promote reductive dechlorination of trichloroethene with direct delivery of H2 in a membrane biofilm reactor

(2012) Michal Ziv-El et al.   BIOTECHNOLOGY AND BIOENGINEERING

PANDAseq: paired-end assembler for illumina sequences

(2012) Andre P Masella et al.   BMC BIOINFORMATICS

Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae

(2012) Darlene D Wagner et al.   BMC GENOMICS

Chain elongation with reactor microbiomes: upgrading dilute ethanol to medium-chain carboxylates

(2012) Matthew T. Agler et al.   Energy & Environmental Science

Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi

(2012) F. E. Loffler et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Role of bicarbonate as a pH buffer and electron sink in microbial dechlorination of chloroethenes

(2012) Anca G Delgado et al.   Microbial Cell Factories

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Development and characterization of DehaloR^2, a novel anaerobic microbial consortium performing rapid dechlorination of TCE to ethene

(2011) Michal Ziv-El et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Production of hexanoic acid from d-galactitol by a newly isolated Clostridium sp. BS-1

(2010) Byoung Seung Jeon et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production

(2010) Jessica R. Sieber et al.   ENVIRONMENTAL MICROBIOLOGY

Geochemical Impacts to Groundwater from Geologic Carbon Sequestration: Controls on pH and Inorganic Carbon Concentrations from Reaction Path and Kinetic Modeling

(2010) Richard T. Wilkin et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Field-Scale Evaluation of Bioaugmentation Dosage for Treating Chlorinated Ethenes

(2010) Charles E. Schaefer et al.   GROUND WATER MONITORING AND REMEDIATION

A review: Advances in microbial remediation of trichloroethylene (TCE)

(2010) Prabhakar Pant et al.   JOURNAL OF ENVIRONMENTAL SCIENCES

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Design tool for estimation of buffer requirement for enhanced reductive dechlorination of chlorinated solvents in groundwater

(2009) Clare Robinson et al.   ENVIRONMENTAL MODELLING & SOFTWARE

Ecophysiology of syntrophic communities that degrade saturated and unsaturated long-chain fatty acids

(2009) Diana Z. Sousa et al.   FEMS MICROBIOLOGY ECOLOGY

Spatial heterogeneity of dechlorinating bacteria and limiting factors forin situ trichloroethene dechlorination revealed by analyses of sediment cores from a polluted field site

(2009) Kerstin Dowideit et al.   FEMS MICROBIOLOGY ECOLOGY

Large-scale production of bacterial consortia for remediation of chlorinated solvent-contaminated groundwater

(2009) Simon Vainberg et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

pH control for enhanced reductive bioremediation of chlorinated solvent source zones

(2009) Clare Robinson et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Group Contribution Method for Thermodynamic Analysis of Complex Metabolic Networks

(2008) Matthew D. Jankowski et al.   BIOPHYSICAL JOURNAL

Microbial reductive dechlorination of trichloroethene to ethene with electrodes serving as electron donors without the external addition of redox mediators

(2008) Federico Aulenta et al.   BIOTECHNOLOGY AND BIOENGINEERING

Demonstration of Enhanced Bioremediation in a TCE Source Area at Launch Complex 34, Cape Canaveral Air Force Station

(2008) E.D. Hood et al.   GROUND WATER MONITORING AND REMEDIATION

Continuous-flow column study of reductive dehalogenation of PCE upon bioaugmentation with the Evanite enrichment culture

(2008) Mohammad F. Azizian et al.   JOURNAL OF CONTAMINANT HYDROLOGY

The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features

(2008) H. Seedorf et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Alcohol production through volatile fatty acids reduction with hydrogen as electron donor by mixed cultures

(2008) Kirsten J.J. Steinbusch et al.   WATER RESEARCH