The Draft Genome of a Flat Peach (Prunus persica L. cv. ‘124 Pan’) Provides Insights into Its Good Fruit Flavor Traits

The complete functional characterisation of the terpene synthase family in tomato

(2020) Fei Zhou et al.   NEW PHYTOLOGIST

Comparative (Within Species) Genomics of the Vitis vinifera L. Terpene Synthase Family to Explore the Impact of Genotypic Variation Using Phased Diploid Genomes

(2020) Samuel Jacobus Smit et al.   Frontiers in Genetics

A 1.7‐Mb chromosomal inversion downstream of a PpOFP1 gene is responsible for flat fruit shape in peach

(2020) Hui Zhou et al.   PLANT BIOTECHNOLOGY JOURNAL

Diversity and function of terpene synthases in the production of carrot aroma and flavor compounds

(2020) Andrew Muchlinski et al.   Scientific Reports

The carrot monoterpene synthase gene cluster on chromosome 4 harbours genes encoding flavour-associated sabinene synthases

(2020) Sven Reichardt et al.   Horticulture Research

Gene copy number variations as signatures of adaptive evolution in the parthenogenetic, plant‐parasitic nematode Meloidogyne incognita

(2019) Philippe Castagnone‐Sereno et al.   MOLECULAR ECOLOGY

Copy Number Variation in Domestication

(2019) Zoe N. Lye et al.   TRENDS IN PLANT SCIENCE

Prunus genetics and applications after de novo genome sequencing: achievements and prospects

(2019) Maria José Aranzana et al.   Horticulture Research

MCMCtreeR: functions to prepare MCMCtree analyses and visualize posterior ages on trees

(2019) Mark N Puttick   BIOINFORMATICS

A Comprehensive Survey on the Terpene Synthase Gene Family Provides New Insight into Its Evolutionary Patterns

(2019) Shu-Ye Jiang et al.   Genome Biology and Evolution

Profiling of volatile terpenes from almond (Prunus dulcis) young fruits and characterization of seven terpene synthase genes

(2019) Bhagwat Nawade et al.   PLANT SCIENCE

The apricot (Prunus armeniaca L.) genome elucidates Rosaceae evolution and beta-carotenoid synthesis

(2019) Fengchao Jiang et al.   Horticulture Research

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome re-sequencing reveals the evolutionary history of peach fruit edibility

(2018) Yang Yu et al.   Nature Communications

Genome-wide association study of 12 agronomic traits in peach

(2016) Ke Cao et al.   Nature Communications

A Unique Mutation in a MYB Gene Cosegregates with the Nectarine Phenotype in Peach

(2014) Elisa Vendramin et al.   PLoS One

The MaSuRCA genome assembler

(2013) Aleksey V. Zimin et al.   BIOINFORMATICS

Infernal 1.1: 100-fold faster RNA homology searches

(2013) E. P. Nawrocki et al.   BIOINFORMATICS

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

(2013) Ignazio Verde et al.   NATURE GENETICS

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

(2012) Y. Wang et al.   NUCLEIC ACIDS RESEARCH

The genome of Prunus mume

(2012) Qixiang Zhang et al.   Nature Communications

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

(2011) Carson Holt et al.   BMC BIOINFORMATICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

The family of terpene synthases in plants: a mid-size family of genes for specialized metabolism that is highly diversified throughout the kingdom

(2011) Feng Chen et al.   PLANT JOURNAL

Expression of Genes Associated with Aroma Formation Derived from the Fatty Acid Pathway during Peach Fruit Ripening

(2010) Bo Zhang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

(2010) K. Wang et al.   NUCLEIC ACIDS RESEARCH

KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies

(2010) Dapeng Wang et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Volatile characteristics of 50 peaches and nectarines evaluated by HP–SPME with GC–MS

(2009) Yiju Wang et al.   FOOD CHEMISTRY

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Aggressive assembly of pyrosequencing reads with mates

(2008) Jason R. Miller et al.   BIOINFORMATICS