The healthy human virome: from virus–host symbiosis to disease

Analysis of metagenome-assembled viral genomes from the human gut reveals diverse putative CrAss-like phages with unique genomic features

(2021) Natalya Yutin et al.   Nature Communications

Global Organization and Proposed Megataxonomy of the Virus World

(2020) Eugene V. Koonin et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Human Endogenous Retroviruses (HERVs): Shaping the Innate Immune Response in Cancers

(2020) Vincent Alcazer et al.   Cancers

The new scope of virus taxonomy: partitioning the virosphere into 15 hierarchical ranks

(2020)   Nature Microbiology

A tissue level atlas of the healthy human virome

(2020) Ryuichi Kumata et al.   BMC BIOLOGY

Torque teno viruses in health and disease

(2020) Brett Webb et al.   VIRUS RESEARCH

Endogenous Retroviruses Walk a Fine Line between Priming and Silencing

(2020) Harrison Cullen et al.   Viruses-Basel

Illuminating the human virome in health and disease

(2020) Fatemeh Adiliaghdam et al.   Genome Medicine

Human Endogenous Retrovirus K (HML-2) in Health and Disease

(2020) Bei Xue et al.   Frontiers in Microbiology

The Race between Host Antiviral Innate Immunity and the Immune Evasion Strategies of Herpes Simplex Virus 1

(2020) Huifang Zhu et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The structural basis of herpesvirus entry

(2020) Sarah A. Connolly et al.   NATURE REVIEWS MICROBIOLOGY

The Virome of Acute Respiratory Diseases in Individuals at Risk of Zoonotic Infections

(2020) Nguyen Thi Kha Tu et al.   Viruses-Basel

Cytomegalovirus as an immunomodulator across the lifespan

(2020) Eleanor C Semmes et al.   Current Opinion in Virology

Progressive multifocal leukoencephalopathy and the spectrum of JC virus-related disease

(2020) Irene Cortese et al.   Nature Reviews Neurology

Endogenous Retroviruses Drive Resistance and Promotion of Exogenous Retroviral Homologs

(2020) Elliott S. Chiu et al.   Annual Review of Animal Biosciences

Estimation of the worldwide seroprevalence of cytomegalovirus: A systematic review and meta-analysis

(2019) Mohamed Zuhair et al.   REVIEWS IN MEDICAL VIROLOGY

ICTV Virus Taxonomy Profile: Parvoviridae

(2019) Susan F. Cotmore et al.   JOURNAL OF GENERAL VIROLOGY

Origins and evolutionary consequences of ancient endogenous retroviruses

(2019) Welkin E. Johnson   NATURE REVIEWS MICROBIOLOGY

Pepper mild mottle virus: Agricultural menace turned effective tool for microbial water quality monitoring and assessing (waste)water treatment technologies

(2019) Erin M. Symonds et al.   PLoS Pathogens

Fighting the Public Health Burden of AIDS with the Human Pegivirus

(2019) Scott Greenhalgh et al.   AMERICAN JOURNAL OF EPIDEMIOLOGY

Multiple origins of prokaryotic and eukaryotic single-stranded DNA viruses from bacterial and archaeal plasmids

(2019) Darius Kazlauskas et al.   Nature Communications

Emerging Human Parvoviruses: The Rocky Road to Fame

(2019) Maria Söderlund-Venermo   Annual Review of Virology

Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes

(2019) Simon Roux et al.   Nature Microbiology

The Human Gut Virome Is Highly Diverse, Stable, and Individual Specific

(2019) Andrey N. Shkoporov et al.   Cell Host & Microbe

Immunity to commensal papillomaviruses protects against skin cancer

(2019) John D. Strickley et al.   NATURE

Evolutionary entanglement of mobile genetic elements and host defence systems: guns for hire

(2019) Eugene V. Koonin et al.   NATURE REVIEWS GENETICS

Smacoviridae: a new family of animal-associated single-stranded DNA viruses

(2018) Arvind Varsani et al.   ARCHIVES OF VIROLOGY

Epidemiology and burden of HPV-related disease

(2018) Beatriz Serrano et al.   BEST PRACTICE & RESEARCH CLINICAL OBSTETRICS & GYNAECOLOGY

Plasmid Partitioning by Human Tumor Viruses

(2018) Ya-Fang Chiu et al.   JOURNAL OF VIROLOGY

Lack of evidence of mimivirus replication in human PBMCs

(2018) Jônatas Abrahão et al.   MICROBES AND INFECTION

Extensive conservation of prokaryotic ribosomal binding sites in known and novel picobirnaviruses

(2018) Siddharth R. Krishnamurthy et al.   VIROLOGY

Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae

(2018) William Marciel de Souza et al.   VIROLOGY

Novel anelloviruses identified in buccal swabs of Antarctic fur seals

(2018) Adele Crane et al.   VIRUS GENES

Beta and Gamma Human Herpesviruses: Agonistic and Antagonistic Interactions with the Host Immune System

(2018) Mario E. Cruz-Muñoz et al.   Frontiers in Microbiology

The human papillomavirus (HPV)-related cancer biology: An overview

(2018) Rodrigo Pinheiro Araldi et al.   BIOMEDICINE & PHARMACOTHERAPY

Molecular mechanisms of viral oncogenesis in humans

(2018) Nathan A. Krump et al.   NATURE REVIEWS MICROBIOLOGY

The depths of virus exaptation

(2018) Eugene V Koonin et al.   Current Opinion in Virology

Human Endogenous Retroviruses Are Ancient Acquired Elements Still Shaping Innate Immune Responses

(2018) Nicole Grandi et al.   Frontiers in Immunology

Biology and Taxonomy of crAss-like Bacteriophages, the Most Abundant Virus in the Human Gut

(2018) Emma Guerin et al.   Cell Host & Microbe

Human endogenous retrovirus-K (HML-2): a comprehensive review

(2018) Marta Garcia-Montojo et al.   CRITICAL REVIEWS IN MICROBIOLOGY

ERVmap analysis reveals genome-wide transcription of human endogenous retroviruses

(2018) Maria Tokuyama et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Origins and Evolution of the Global RNA Virome

(2018) Yuri I. Wolf et al.   mBio

Mechanisms of persistence by small DNA tumor viruses

(2018) Nathan A Krump et al.   Current Opinion in Virology

Biology, evolution, and medical importance of polyomaviruses: An update

(2017) Ugo Moens et al.   INFECTION GENETICS AND EVOLUTION

Anellovirus loads are associated with outcomes in pediatric lung transplantation

(2017) Joshua A. Blatter et al.   PEDIATRIC TRANSPLANTATION

Statoviruses, A novel taxon of RNA viruses present in the gastrointestinal tracts of diverse mammals

(2017) Andrew B. Janowski et al.   VIROLOGY

Human Papillomavirus and the DNA Damage Response: Exploiting Host Repair Pathways for Viral Replication

(2017) Chelsey Spriggs et al.   Viruses-Basel

The blood DNA virome in 8,000 humans

(2017) Ahmed Moustafa et al.   PLoS Pathogens

Symbiosis: Viruses as Intimate Partners

(2017) Marilyn J. Roossinck et al.   Annual Review of Virology

Discovery of an expansive bacteriophage family that includes the most abundant viruses from the human gut

(2017) Natalya Yutin et al.   Nature Microbiology

Metagenomics and the Human Virome in Asymptomatic Individuals

(2016) Nicolás Rascovan et al.   Annual Review of Microbiology

Genomoviridae: a new family of widespread single-stranded DNA viruses

(2016) Mart Krupovic et al.   ARCHIVES OF VIROLOGY

SIV Infection-Mediated Changes in Gastrointestinal Bacterial Microbiome and Virome Are Associated with Immunodeficiency and Prevented by Vaccination

(2016) Scott A. Handley et al.   Cell Host & Microbe

Altered Virome and Bacterial Microbiome in Human Immunodeficiency Virus-Associated Acquired Immunodeficiency Syndrome

(2016) Cynthia L. Monaco et al.   Cell Host & Microbe

Torquetenovirus: the human virome from bench to bedside

(2016) D. Focosi et al.   CLINICAL MICROBIOLOGY AND INFECTION

Human Parvoviruses

(2016) Jianming Qiu et al.   CLINICAL MICROBIOLOGY REVIEWS

The role of giant viruses of amoebas in humans

(2016) Philippe Colson et al.   CURRENT OPINION IN MICROBIOLOGY

Healthy human gut phageome

(2016) Pilar Manrique et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Human bocavirus: Current knowledge and future challenges

(2016) Marcello Guido et al.   WORLD JOURNAL OF GASTROENTEROLOGY

The Ancient Evolutionary History of Polyomaviruses

(2016) Christopher B. Buck et al.   PLoS Pathogens

The Strange, Expanding World of Animal Hepaciviruses

(2016) Alex S. Hartlage et al.   Annual Review of Virology

The Immunology of Epstein-Barr Virus–Induced Disease

(2015) Graham S. Taylor et al.   Annual Review of Immunology

Disease-Specific Alterations in the Enteric Virome in Inflammatory Bowel Disease

(2015) Jason M. Norman et al.   CELL

Response of Mammalian Macrophages to Challenge with the Chlorovirus Acanthocystis turfacea Chlorella Virus 1

(2015) Thomas M. Petro et al.   JOURNAL OF VIROLOGY

Human papillomavirus molecular biology and disease association

(2015) John Doorbar et al.   REVIEWS IN MEDICAL VIROLOGY

Varicella zoster virus infection

(2015) Anne A. Gershon et al.   Nature Reviews Disease Primers

A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes

(2014) Bas E. Dutilh et al.   Nature Communications

Giant Viruses of Amoebae as Potential Human Pathogens

(2013) Philippe Colson et al.   INTERVIROLOGY

Evidence of the megavirome in humans

(2013) Philippe Colson et al.   JOURNAL OF CLINICAL VIROLOGY

Marseillevirus-Like Virus Recovered From Blood Donated by Asymptomatic Humans

(2013) Nikolay Popgeorgiev et al.   JOURNAL OF INFECTIOUS DISEASES

Rapid evolution of the human gut virome

(2013) S. Minot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A virocentric perspective on the evolution of life

(2013) Eugene V Koonin et al.   Current Opinion in Virology

The major role of viruses in cellular evolution: facts and hypotheses

(2013) Patrick Forterre et al.   Current Opinion in Virology

Role of GB virus C in modulating HIV disease

(2012) Carolynne Schwarze-Zander et al.   Expert Review of Anti-Infective Therapy

Picobirnavirus infections: viral persistence and zoonotic potential

(2012) Balasubramanian Ganesh et al.   REVIEWS IN MEDICAL VIROLOGY

Microviridae Goes Temperate: Microvirus-Related Proviruses Reside in the Genomes of Bacteroidetes

(2011) Mart Krupovic et al.   PLoS One

Parvovirus B19 DNA Is Commonly Harboured in Human Skin

(2010) F. Bonvicini et al.   DERMATOLOGY

The GB viruses: a review and proposed classification of GBV-A, GBV-C (HGV), and GBV-D in genus Pegivirus within the family Flaviviridae

(2010) J. T. Stapleton et al.   JOURNAL OF GENERAL VIROLOGY

Human bocavirus

(2007) Tobias Allander   JOURNAL OF CLINICAL VIROLOGY