ERVmap analysis reveals genome-wide transcription of human endogenous retroviruses
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Title
ERVmap analysis reveals genome-wide transcription of human endogenous retroviruses
Authors
Keywords
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Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 115, Issue 50, Pages 12565-12572
Publisher
Proceedings of the National Academy of Sciences
Online
2018-11-20
DOI
10.1073/pnas.1814589115
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- (2016) Artem Babaian et al. Mobile DNA
- Molecular and Genetic Properties of Tumors Associated with Local Immune Cytolytic Activity
- (2015) Michael S. Rooney et al. CELL
- Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells
- (2015) Edward J. Grow et al. NATURE
- The Dfam database of repetitive DNA families
- (2015) Robert Hubley et al. NUCLEIC ACIDS RESEARCH
- Cytomegalovirus infection enhances the immune response to influenza
- (2015) David Furman et al. Science Translational Medicine
- Human endogenous retrovirus-K contributes to motor neuron disease
- (2015) Wenxue Li et al. Science Translational Medicine
- Spotting the enemy within: Targeted silencing of foreign DNA in mammalian genomes by the Krüppel-associated box zinc finger protein family
- (2015) Gernot Wolf et al. Mobile DNA
- Repbase Update, a database of repetitive elements in eukaryotic genomes
- (2015) Weidong Bao et al. Mobile DNA
- Transcriptional landscape of repetitive elements in normal and cancer human cells
- (2014) Steven W Criscione et al. BMC GENOMICS
- Retroviral Transcriptional Regulation and Embryonic Stem Cells: War and Peace
- (2014) Sharon Schlesinger et al. MOLECULAR AND CELLULAR BIOLOGY
- The SLE Transcriptome Exhibits Evidence of Chronic Endotoxin Exposure and Has Widespread Dysregulation of Non-Coding and Coding RNAs
- (2014) Lihua Shi et al. PLoS One
- Trans-activation, post-transcriptional maturation, and induction of antibodies to HERV-K (HML-2) envelope transmembrane protein in HIV-1 infection
- (2014) Henri-Alexandre Michaud et al. Retrovirology
- Transcriptional Profiling of Human Endogenous Retrovirus Group HERV-K(HML-2) Loci in Melanoma
- (2013) Katja Schmitt et al. Genome Biology and Evolution
- DNA methylation of human endogenous retrovirus in systemic lupus erythematosus
- (2013) Jeerawat Nakkuntod et al. JOURNAL OF HUMAN GENETICS
- Comprehensive Analysis of Human Endogenous Retrovirus Group HERV-W Locus Transcription in Multiple Sclerosis Brain Lesions by High-Throughput Amplicon Sequencing
- (2013) K. Schmitt et al. JOURNAL OF VIROLOGY
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- Btrim: A fast, lightweight adapter and quality trimming program for next-generation sequencing technologies
- (2011) Yong Kong GENOMICS
- Characterization of Human Endogenous Retroviral Elements in the Blood of HIV-1-Infected Individuals
- (2011) R. Contreras-Galindo et al. JOURNAL OF VIROLOGY
- Repetitive DNA and next-generation sequencing: computational challenges and solutions
- (2011) Todd J. Treangen et al. NATURE REVIEWS GENETICS
- Identification, characterization, and comparative genomic distribution of the HERV-K (HML-2) group of human endogenous retroviruses
- (2011) Ravi P Subramanian et al. Retrovirology
- A revised nomenclature for transcribed human endogenous retroviral loci
- (2011) Jens Mayer et al. Mobile DNA
- Identification of active loci of a human endogenous retrovirus in neurons of patients with amyotrophic lateral sclerosis
- (2010) Renée Douville et al. ANNALS OF NEUROLOGY
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Redefining Chronic Viral Infection
- (2009) Herbert W. Virgin et al. CELL
- Effects of Retroviruses on Host Genome Function
- (2008) Patric Jern et al. Annual Review of Genetics
- Human Endogenous Retrovirus K Triggers an Antigen-Specific Immune Response in Breast Cancer Patients
- (2008) F. Wang-Johanning et al. CANCER RESEARCH
- Targeting of the immune system in systemic lupus erythematosus
- (2008) Meera Ramanujam et al. EXPERT REVIEWS IN MOLECULAR MEDICINE
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