Selective time-dependent changes in activity and cell-specific gene expression in human postmortem brain

Genes of the undead: hibernation and death display different gene profiles

(2019) Hanane Hadj-Moussa et al.   FEBS LETTERS

Restoration of brain circulation and cellular functions hours post-mortem

(2019) Zvonimir Vrselja et al.   NATURE

Identifying targets for preventing epilepsy using systems biology of the human brain

(2019) Allison Kirchner et al.   NEUROPHARMACOLOGY

Effect of Postmortem Interval and Years in Storage on RNA Quality of Tissue at a Repository of the NIH NeuroBioBank

(2018) Kimberly White et al.   BIOPRESERVATION AND BIOBANKING

The effects of death and post-mortem cold ischemia on human tissue transcriptomes

(2018) Pedro G. Ferreira et al.   Nature Communications

Effect of Postmortem Interval and Years in Storage on RNA Quality of Tissue at a Repository of the NIH NeuroBioBank

(2018) Kimberly White et al.   Biopreservation and Biobanking

TISSUES 2.0: an integrative web resource on mammalian tissue expression

(2018) Oana Palasca et al.   Database-The Journal of Biological Databases and Curation

Inference of cell type content from human brain transcriptomic datasets illuminates the effects of age, manner of death, dissection, and psychiatric diagnosis

(2018) Megan Hastings Hagenauer et al.   PLoS One

Accurate predictions of postmortem interval using linear regression analyses of gene meter expression data

(2017) M. Colby Hunter et al.   FORENSIC SCIENCE INTERNATIONAL

Tracing the dynamics of gene transcripts after organismal death

(2017) Alex E. Pozhitkov et al.   Open Biology

Using Postmortem hippocampi tissue can interfere with differential gene expression analysis of the epileptogenic process

(2017) João Paulo Lopes Born et al.   PLoS One

Systematic analysis of gene expression patterns associated with postmortem interval in human tissues

(2017) Yizhang Zhu et al.   Scientific Reports

Characterization of gene expression profiling of mouse tissues obtained during the postmortem interval

(2016) Sayaka Sobue et al.   EXPERIMENTAL AND MOLECULAR PATHOLOGY

Systematically characterizing dysfunctional long intergenic non-coding RNAs in multiple brain regions of major psychosis

(2016) Jing Hu et al.   Oncotarget

Disruption of an Evolutionarily Novel Synaptic Expression Pattern in Autism

(2016) Xiling Liu et al.   PLOS BIOLOGY

Individual Case Analysis of Postmortem Interval Time on Brain Tissue Preservation

(2016) Jeffrey A. Blair et al.   PLoS One

Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data

(2015) Konstantin Okonechnikov et al.   BIOINFORMATICS

Integrative analyses of proteomics and RNA transcriptomics implicate mitochondrial processes, protein folding pathways and GWAS loci in Parkinson disease

(2015) Alexandra Dumitriu et al.   BMC Medical Genomics

A survey of human brain transcriptome diversity at the single cell level

(2015) Spyros Darmanis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

FactoMineR: AnRPackage for Multivariate Analysis

(2015) Sébastien Lê et al.   Journal of Statistical Software

RNA Sequence Analysis of Human Huntington Disease Brain Reveals an Extensive Increase in Inflammatory and Developmental Gene Expression

(2015) Adam Labadorf et al.   PLoS One

Predicting novel histopathological microlesions in human epileptic brain through transcriptional clustering

(2014) Fabien Dachet et al.   BRAIN

Diversity and dynamics of the Drosophila transcriptome

(2014) James B. Brown et al.   NATURE

The Regulation of Transcription in Memory Consolidation

(2014) Cristina M. Alberini et al.   Cold Spring Harbor Perspectives in Biology

Brain temperature and its fundamental properties: a review for clinical neuroscientists

(2014) Huan Wang et al.   Frontiers in Neuroscience

Animal models of human disease: Challenges in enabling translation

(2013) Paul McGonigle et al.   BIOCHEMICAL PHARMACOLOGY

Lack of evidence for existence of noncanonical RNA editing

(2013) Robert Piskol et al.   NATURE BIOTECHNOLOGY

Surge of neurophysiological coherence and connectivity in the dying brain

(2013) J. Borjigin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic responses in mouse models poorly mimic human inflammatory diseases

(2013) Junhee Seok et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Activity-Dependent Human Brain Coding/Noncoding Gene Regulatory Networks

(2012) L. Lipovich et al.   GENETICS

Layer-Specific CREB Target Gene Induction in Human Neocortical Epilepsy

(2012) T. L. Beaumont et al.   JOURNAL OF NEUROSCIENCE

The post mortem temperature plateau and its role in the estimation of time of death. A review

(2012) Jimmy L. Smart et al.   Legal Medicine

Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome

(2012) Zhiyu Peng et al.   NATURE BIOTECHNOLOGY

Animal models in the drug discovery pipeline for Alzheimer's disease

(2011) Debby Van Dam et al.   BRITISH JOURNAL OF PHARMACOLOGY

Histone tail acetylation in brain occurs in an unpredictable fashion after death

(2011) Marta Barrachina et al.   CELL AND TISSUE BANKING

Selection of Candidate Housekeeping Genes for Normalization in Human Postmortem Brain Samples

(2011) Ilaria Penna et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

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(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Postmortem interval effect on RNA and gene expression in human brain tissue

(2010) Alex C. Birdsill et al.   CELL AND TISSUE BANKING

The developmental transcriptome of Drosophila melanogaster

(2010) Brenton R. Graveley et al.   NATURE

Identification of valid reference genes for the normalization of RT qPCR gene expression data in human brain tissue

(2008) David TR Coulson et al.   BMC MOLECULAR BIOLOGY

Assessing quantitative post-mortem changes in the gray matter of the human frontal cortex proteome by 2-D DIGE

(2008) Anna Crecelius et al.   PROTEOMICS