Inference of cell type content from human brain transcriptomic datasets illuminates the effects of age, manner of death, dissection, and psychiatric diagnosis

Evidence for alterations of the glial syncytial function in major depressive disorder

(2016) Adriana Medina et al.   JOURNAL OF PSYCHIATRIC RESEARCH

Adult mouse cortical cell taxonomy revealed by single cell transcriptomics

(2016) Bosiljka Tasic et al.   NATURE NEUROSCIENCE

Gene expression elucidates functional impact of polygenic risk for schizophrenia

(2016) Menachem Fromer et al.   NATURE NEUROSCIENCE

Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain

(2016) B. B. Lake et al.   SCIENCE

CellCODE: a robust latent variable approach to differential expression analysis for heterogeneous cell populations

(2015) Maria Chikina et al.   BIOINFORMATICS

A comprehensive joint analysis of the long and short RNA transcriptomes of human erythrocytes

(2015) Jennifer F. Doss et al.   BMC GENOMICS

Brain abnormalities in bipolar disorder detected by quantitative T1ρ mapping

(2015) C P Johnson et al.   MOLECULAR PSYCHIATRY

Distinctive transcriptome alterations of prefrontal pyramidal neurons in schizophrenia and schizoaffective disorder

(2015) D Arion et al.   MOLECULAR PSYCHIATRY

A survey of human brain transcriptome diversity at the single cell level

(2015) Spyros Darmanis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic and inflammatory genes in schizophrenia

(2015) Kayla A. Chase et al.   PSYCHIATRY RESEARCH

Differentiation of oligodendrocyte precursors is impaired in the prefrontal cortex in schizophrenia

(2015) Sarah A. Mauney et al.   SCHIZOPHRENIA RESEARCH

Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq

(2015) A. Zeisel et al.   SCIENCE

Conducting Meta-Analyses inRwith themetaforPackage

(2015) Wolfgang Viechtbauer   Journal of Statistical Software

STEP Levels Are Unchanged in Pre-Frontal Cortex and Associative Striatum in Post-Mortem Human Brain Samples from Subjects with Schizophrenia, Bipolar Disorder and Major Depressive Disorder

(2015) Thomas A. Lanz et al.   PLoS One

Molecular Profiles of Parvalbumin-Immunoreactive Neurons in the Superior Temporal Cortex in Schizophrenia

(2014) Charmaine Y. Pietersen et al.   JOURNAL OF NEUROGENETICS

An RNA-Sequencing Transcriptome and Splicing Database of Glia, Neurons, and Vascular Cells of the Cerebral Cortex

(2014) Y. Zhang et al.   JOURNAL OF NEUROSCIENCE

CellMix: a comprehensive toolbox for gene expression deconvolution

(2013) R. Gaujoux et al.   BIOINFORMATICS

Computational deconvolution: extracting cell type-specific information from heterogeneous samples

(2013) Shai S Shen-Orr et al.   CURRENT OPINION IN IMMUNOLOGY

Circadian patterns of gene expression in the human brain and disruption in major depressive disorder

(2013) J. Z. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Measuring cell-type specific differential methylation in human brain tissue

(2013) Carolina M Montaño et al.   GENOME BIOLOGY

AffyRNADegradation: control and correction of RNA quality effects in GeneChip expression data

(2012) Mario Fasold et al.   BIOINFORMATICS

Cell population-specific expression analysis of human cerebellum

(2012) Alexandre Kuhn et al.   BMC GENOMICS

Genome-wide expression profiling of schizophrenia using a large combined cohort

(2012) M Mistry et al.   MOLECULAR PSYCHIATRY

An anatomically comprehensive atlas of the adult human brain transcriptome

(2012) Michael J. Hawrylycz et al.   NATURE

The Fibroblast Growth Factor Family: Neuromodulation of Affective Behavior

(2012) Cortney A. Turner et al.   NEURON

Aging reduces total neuron number in the dorsal component of the rodent prefrontal cortex

(2011) Alexis M. Stranahan et al.   JOURNAL OF COMPARATIVE NEUROLOGY

Transcription and pathway analysis of the superior temporal cortex and anterior prefrontal cortex in schizophrenia

(2011) Michael R. Barnes et al.   JOURNAL OF NEUROSCIENCE RESEARCH

Population-specific expression analysis (PSEA) reveals molecular changes in diseased brain

(2011) Alexandre Kuhn et al.   NATURE METHODS

The first decade and beyond of transcriptional profiling in schizophrenia

(2011) P. Adolfo Sequeira et al.   NEUROBIOLOGY OF DISEASE

Gene Expression and Genetic Variation Data Implicate PCLO in Bipolar Disorder

(2010) Kwang H. Choi et al.   BIOLOGICAL PSYCHIATRY

How the primate fornix is affected by age

(2010) Alan Peters et al.   JOURNAL OF COMPARATIVE NEUROLOGY

The Mouse Blood-Brain Barrier Transcriptome: A New Resource for Understanding the Development and Function of Brain Endothelial Cells

(2010) Richard Daneman et al.   PLoS One

Schizophrenia from a neural circuitry perspective: advancing toward rational pharmacological therapies

(2009) David A. Lewis et al.   JOURNAL OF CLINICAL INVESTIGATION

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Deconvolution of Blood Microarray Data Identifies Cellular Activation Patterns in Systemic Lupus Erythematosus

(2009) Alexander R. Abbas et al.   PLoS One

Glial Loss in the Prefrontal Cortex Is Sufficient to Induce Depressive-like Behaviors

(2008) Mounira Banasr et al.   BIOLOGICAL PSYCHIATRY

Putative psychosis genes in the prefrontal cortex: combined analysis of gene expression microarrays

(2008) Kwang Ho Choi et al.   BMC Psychiatry

Molecular profiles of schizophrenia in the CNS at different stages of illness

(2008) Sujatha Narayan et al.   BRAIN RESEARCH

Application of a Translational Profiling Approach for the Comparative Analysis of CNS Cell Types

(2008) Joseph P. Doyle et al.   CELL

A Transcriptome Database for Astrocytes, Neurons, and Oligodendrocytes: A New Resource for Understanding Brain Development and Function

(2008) J. D. Cahoy et al.   JOURNAL OF NEUROSCIENCE

Postmortem interval alters the water relaxation and diffusion properties of rat nervous tissue — Implications for MRI studies of human autopsy samples

(2008) Timothy M. Shepherd et al.   NEUROIMAGE

Synapses are lost during aging in the primate prefrontal cortex

(2007) A. Peters et al.   NEUROSCIENCE