Transcriptional regulation of wound suberin deposition in potato cultivars with differential wound healing capacity

Tissue-Autonomous Phenylpropanoid Production Is Essential for Establishment of Root Barriers

(2021) Tonni Grube Andersen et al.   CURRENT BIOLOGY

SUBERMAN regulates developmental suberization of the Arabidopsis root endodermis

(2020) Hagai Cohen et al.   PLANT JOURNAL

AtMYB92 enhances fatty acid synthesis and suberin deposition in leaves of Nicotiana benthamiana

(2020) Alexandra To et al.   PLANT JOURNAL

Developmental programs interact with abscisic acid to coordinate root suberization in Arabidopsis

(2020) Chunhua Wang et al.   PLANT JOURNAL

ABF2 and MYB transcription factors dominate feruloyl transferase FHT gene involved in ABA-mediated wound suberization of kiwifruit

(2019) Xiaopeng Wei et al.   JOURNAL OF EXPERIMENTAL BOTANY

Overexpression of ANAC046 Promotes Suberin Biosynthesis in Roots of Arabidopsis thaliana

(2019) Kashif Mahmood et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Silencing against the conserved NAC domain of the potato StNAC103 reveals new NAC candidates to repress the suberin associated waxes in phellem

(2019) Marçal Soler et al.   PLANT SCIENCE

Differential induction of polar and non-polar metabolism during wound-induced suberization in potato (Solanum tuberosum L.) tubers

(2018) Kathlyn N. Woolfson et al.   PLANT JOURNAL

Spodoptera litura-mediated chemical defense is differentially modulated in older and younger systemic leaves of Solanum lycopersicum

(2018) Anish Kundu et al.   PLANTA

GCalignR: An R package for aligning gas-chromatography data for ecological and evolutionary studies

(2018) Meinolf Ottensmann et al.   PLoS One

Chlorogenic acid-mediated chemical defence of plants against insect herbivores

(2018) A. Kundu et al.   PLANT BIOLOGY

Chlorogenic acid, anthocyanin and flavan-3-ol biosynthesis in flesh and skin of Andean potato tubers ( Solanum tuberosum subsp. andigena )

(2017) Matías Ariel Valiñas et al.   FOOD CHEMISTRY

What happens in the pith stays in the pith: tissue-localized defense responses facilitate chemical niche differentiation between two spatially separated herbivores

(2017) Gisuk Lee et al.   PLANT JOURNAL

Three Pectin Methylesterase Inhibitors Protect Cell Wall Integrity for Arabidopsis Immunity to Botrytis

(2017) Vincenzo Lionetti et al.   PLANT PHYSIOLOGY

Stimulatory involvement of abscisic acid in wound suberization of postharvest kiwifruit

(2017) Xueyuan Han et al.   SCIENTIA HORTICULTURAE

Potato native and wound periderms are differently affected by down-regulation of FHT, a suberin feruloyl transferase

(2017) Liqing Jin et al.   PHYTOCHEMISTRY

Adaptation of Root Function by Nutrient-Induced Plasticity of Endodermal Differentiation

(2016) Marie Barberon et al.   CELL

Silencing of the potatoStNAC103gene enhances the accumulation of suberin polyester and associated wax in tuber skin

(2016) Roger Verdaguer et al.   JOURNAL OF EXPERIMENTAL BOTANY

MdMyb93 is a regulator of suberin deposition in russeted apple fruit skins

(2016) Sylvain Legay et al.   NEW PHYTOLOGIST

MYB107 and MYB9 Homologs Regulate Suberin Deposition in Angiosperms

(2016) Justin Lashbrooke et al.   PLANT CELL

The MYB107 Transcription Factor Positively Regulates Suberin Biosynthesis

(2016) Mingyue Gou et al.   PLANT PHYSIOLOGY

Suberization—the second life of an endodermal cell

(2015) Tonni Grube Andersen et al.   CURRENT OPINION IN PLANT BIOLOGY

Chlorogenic Acid Biosynthesis Appears Linked with Suberin Production in Potato Tuber (Solanum tuberosum)

(2015) Matías Ariel Valiñas et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Transcriptomic changes during tuber dormancy release process revealed by RNA sequencing in potato

(2015) Bailin Liu et al.   JOURNAL OF BIOTECHNOLOGY

Analysis of aliphatic waxes associated with root periderm or exodermis from eleven plant species

(2015) Dylan K. Kosma et al.   PHYTOCHEMISTRY

FastGCN: A GPU Accelerated Tool for Fast Gene Co-Expression Networks

(2015) Meimei Liang et al.   PLoS One

The MYB36 transcription factor orchestrates Casparian strip formation

(2015) Takehiro Kamiya et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cross-talk between signaling pathways: The link between plant secondary metabolite production and wounding stress response

(2015) Daniel A. Jacobo-Velázquez et al.   Scientific Reports

Isolation and Compositional Analysis of Plant Cuticle Lipid Polyester Monomers

(2015) Seamus Jenkin et al.   Jove-Journal of Visualized Experiments

Deconstructing a Plant Macromolecular Assembly: Chemical Architecture, Molecular Flexibility, And Mechanical Performance of Natural and Engineered Potato Suberins

(2014) Olga Serra et al.   BIOMACROMOLECULES

The ABC Transporter ABCG1 Is Required for Suberin Formation in Potato Tuber Periderm

(2014) R. Landgraf et al.   PLANT CELL

Suberin: biosynthesis, regulation, and polymer assembly of a protective extracellular barrier

(2014) Sollapura J. Vishwanath et al.   PLANT CELL REPORTS

AtMYB41 activates ectopic suberin synthesis and assembly in multiple plant species and cell types

(2014) Dylan K. Kosma et al.   PLANT JOURNAL

Radial Transport of Nutrients: The Plant Root as a Polarized Epithelium

(2014) M. Barberon et al.   PLANT PHYSIOLOGY

Wound-induced suberization genes are differentially expressed, spatially and temporally, during closing layer and wound periderm formation

(2014) Edward C. Lulai et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

PLANEX: the plant co-expression database

(2013) Won Yim et al.   BMC PLANT BIOLOGY

Fatty acids and early detection of pathogens

(2013) Justin W Walley et al.   CURRENT OPINION IN PLANT BIOLOGY

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

QsMYB1 expression is modulated in response to heat and drought stresses and during plant recovery in Quercus suber

(2013) Tânia Almeida et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Bleach gel: A simple agarose gel for analyzing RNA quality

(2012) Patrick S. Aranda et al.   ELECTROPHORESIS

Wounding coordinately induces cell wall protein, cell cycle and pectin methyl esterase genes involved in tuber closing layer and wound periderm development

(2012) Jonathan D. Neubauer et al.   JOURNAL OF PLANT PHYSIOLOGY

Identification of an Arabidopsis Fatty Alcohol:Caffeoyl-Coenzyme A Acyltransferase Required for the Synthesis of Alkyl Hydroxycinnamates in Root Waxes

(2012) D. K. Kosma et al.   PLANT PHYSIOLOGY

Genome sequence and analysis of the tuber crop potato

(2011) Xun Xu et al.   NATURE

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

Role of Polyphenol Oxidase, Peroxidase, Phenylalanine Ammonia Lyase, Chlorogenic Acid, and Total Soluble Phenols in Resistance of Potatoes to Soft Rot

(2011) Elizabeth Ngadze et al.   PLANT DISEASE

Abiotic and Biotic Stresses and Changes in the Lignin Content and Composition in Plants

(2010) Jullyana Cristina Magalhães Silva Moura et al.   Journal of Integrative Plant Biology

The Sequence Read Archive

(2010) R. Leinonen et al.   NUCLEIC ACIDS RESEARCH

A feruloyl transferase involved in the biosynthesis of suberin and suberin-associated wax is required for maturation and sealing properties of potato periderm

(2010) Olga Serra et al.   PLANT JOURNAL

Suberin research in the genomics era—New interest for an old polymer

(2010) Kosala Ranathunge et al.   PLANT SCIENCE

Transport barriers made of cutin, suberin and associated waxes

(2010) Lukas Schreiber   TRENDS IN PLANT SCIENCE

MYB transcription factors in Arabidopsis

(2010) Christian Dubos et al.   TRENDS IN PLANT SCIENCE

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Structure of the Polyphenolic Component of Suberin Isolated from Potato (Solanum tuberosum var. Nikola)

(2009) Maija-Liisa Mattinen et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Cinnamyl alcohol dehydrogenases-C and D, key enzymes in lignin biosynthesis, play an essential role in disease resistance in Arabidopsis

(2009) MAURICE TRONCHET et al.   MOLECULAR PLANT PATHOLOGY

Identification of an Arabidopsis Feruloyl-Coenzyme A Transferase Required for Suberin Synthesis

(2009) I. Molina et al.   PLANT PHYSIOLOGY

Surface lipids and plant defenses

(2009) José J. Reina-Pinto et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Silencing of StKCS6 in potato periderm leads to reduced chain lengths of suberin and wax compounds and increased peridermal transpiration

(2008) Olga Serra et al.   JOURNAL OF EXPERIMENTAL BOTANY

CYP86A33-Targeted Gene Silencing in Potato Tuber Alters Suberin Composition, Distorts Suberin Lamellae, and Impairs the Periderm's Water Barrier Function

(2008) O. Serra et al.   PLANT PHYSIOLOGY

AtERF38 (At2g35700), an AP2/ERF family transcription factor gene from Arabidopsis thaliana, is expressed in specific cell types of roots, stems and seeds that undergo suberization

(2008) Eric Lasserre et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The role of carbohydrates in wound-healing of sweetpotato roots at low humidity

(2008) Deborah Rees et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY

Building lipid barriers: biosynthesis of cutin and suberin

(2008) Mike Pollard et al.   TRENDS IN PLANT SCIENCE