Comparative analyses of sooty mould communities from Brazil and Central Europe

Mainland and island populations of Mussaenda kwangtungensis differ in their phyllosphere fungal community composition and network structure

(2020) Xin Qian et al.   Scientific Reports

Comparison of the performance of ITS1 and ITS2 as barcodes in amplicon-based sequencing of bioaerosols

(2020) Hamza Mbareche et al.   PeerJ

Managed and Unmanaged Pinus sylvestris Forest Stands Harbour Similar Diversity and Composition of the Phyllosphere and Soil Fungi

(2020) Jūratė Lynikienė et al.   Microorganisms

Continuing Impacts of Selective Inhibition on Bacterial and Fungal Communities in an Agricultural Soil

(2019) Yanshuo Pan et al.   MICROBIAL ECOLOGY

Impacts of experimental warming and northern light climate on growth and root fungal communities of Scots pine populations

(2019) Karita Saravesi et al.   Fungal Ecology

Relative stability of the Pocillopora acuta microbiome throughout a thermal stress event

(2019) Hannah E. Epstein et al.   CORAL REEFS

Interactive Tree Of Life (iTOL) v4: recent updates and new developments

(2019) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

A few Ascomycota taxa dominate soil fungal communities worldwide

(2019) Eleonora Egidi et al.   Nature Communications

Soil bacterial and fungal communities of six bahiagrass cultivars

(2019) Lukas Beule et al.   PeerJ

Phyllosphere epiphytic and endophytic fungal community and network structures differ in a tropical mangrove ecosystem

(2019) Hui Yao et al.   Microbiome

Characterization of the total and viable bacterial and fungal communities associated with the International Space Station surfaces

(2019) Aleksandra Checinska Sielaff et al.   Microbiome

Euonymus japonicus phyllosphere microbiome is significantly changed by powdery mildew

(2019) Zhuo Zhang et al.   ARCHIVES OF MICROBIOLOGY

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

The role of inoculum dispersal and plant species identity in the assembly of leaf endophytic fungal communities

(2019) Kevin D. Ricks et al.   PLoS One

European mushroom assemblages are darker in cold climates

(2019) Franz-Sebastian Krah et al.   Nature Communications

Influence of the cultivation medium and pH on the pigmentation of Trichophyton rubrum

(2019) Oliver Blechert et al.   PLoS One

Bacterial and fungal endophyte communities differ in trees of natural versus wastewater-treatment wetlands

(2019) Jennifer Janowsky et al.   WETLANDS ECOLOGY AND MANAGEMENT

A Metabarcoding Analysis of the Mycobiome of Wheat Ears Across a Topographically Heterogeneous Field

(2019) Gabriele Schiro et al.   Frontiers in Microbiology

Phyllosphere Fungal Communities of Plum and Antifungal Activity of Indigenous Phenazine-Producing Pseudomonas synxantha Against Monilinia laxa

(2019) Tamara Janakiev et al.   Frontiers in Microbiology

Aphids Influence Soil Fungal Communities in Conventional Agricultural Systems

(2019) Thomas D. J. Wilkinson et al.   Frontiers in Plant Science

Characterization of the Wood Mycobiome of Vitis vinifera in a Vineyard Affected by Esca. Spatial Distribution of Fungal Communities and Their Putative Relation With Leaf Symptoms

(2019) Giovanni Del Frari et al.   Frontiers in Plant Science

Arbuscular mycorrhizal fungal community differentiation along a post-coal mining reclamation chronosequence in South Africa: A potential indicator of ecosystem recovery

(2019) Obinna T. Ezeokoli et al.   APPLIED SOIL ECOLOGY

The needle mycobiome of Picea glauca – A dynamic system reflecting surrounding environment and tree phenological traits

(2019) David G. Würth et al.   Fungal Ecology

Metabarcoding reveals differences in fungal communities between unflooded versus tidal flat soil in coastal saline ecosystem

(2019) Pu-Dong Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Distinct Microbial Community of Phyllosphere Associated with Five Tropical Plants on Yongxing Island, South China Sea

(2019) Lijun Bao et al.   Microorganisms

Fungal community associated with adults of the chestnut gall wasp Dryocosmus kuriphilus after emergence from galls: Taxonomy and functional ecology

(2019) Carmen Morales-Rodriguez et al.   Fungal Biology

Identifying the mechanisms that shape fungal community and metacommunity patterns in Yunnan, China

(2019) Kingsly C. Beng et al.   Fungal Ecology

Grapevine Phyllosphere Community Analysis in Response to Elicitor Application against Powdery Mildew

(2019) Luca Nerva et al.   Microorganisms

Direct comparison of culture-dependent and culture-independent molecular approaches reveal the diversity of fungal endophytic communities in stems of grapevine (Vitis vinifera)

(2018) Asha J. Dissanayake et al.   FUNGAL DIVERSITY

The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications

(2018) Rolf Henrik Nilsson et al.   NUCLEIC ACIDS RESEARCH

Exact sequence variants should replace operational taxonomic units in marker-gene data analysis

(2017) Benjamin J Callahan et al.   ISME Journal

Evaluation of multilocus marker efficacy for delineating mangrove species of West Coast India

(2017) Ankush Ashok Saddhe et al.   PLoS One

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

The Cacti Microbiome: Interplay between Habitat-Filtering and Host-Specificity

(2016) Citlali Fonseca-García et al.   Frontiers in Microbiology

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Influence of culture conditions on medium discoloration and mycelial growth ofDothistroma septosporum

(2015) T. Kowalski et al.   FOREST PATHOLOGY

Microhabitat locality allows multi-species coexistence in terrestrial plant communities

(2015) Jerrold M. Tubay et al.   Scientific Reports

Plant traits and taxonomy drive host associations in tropical phyllosphere fungal communities

(2014) Steven W. Kembel et al.   Botany

Differences in the sugar composition of the honeydew of polyphagous brown soft scale Coccus hesperidum (Hemiptera: Sternorrhyncha: Coccoidea) feeding on various host plants

(2014) Katarzyna GOLAN et al.   EUROPEAN JOURNAL OF ENTOMOLOGY

The sooty moulds

(2014) Putarak Chomnunti et al.   FUNGAL DIVERSITY

Factors shaping community structure of endophytic fungi–evidence from the Pinus-Viscum-system

(2013) Derek Peršoh   FUNGAL DIVERSITY

Factors influencing communities of foliar fungal endophytes in riparian woody plants

(2013) Matthew K. Lau et al.   Fungal Ecology

Diversity of the Capnocheirides rhododendri-dominated fungal community in the phyllosphere of Rhododendron ferrugineum L.

(2013) Fabienne Flessa et al.   NOVA HEDWIGIA

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Diverse Honeydew-Consuming Fungal Communities Associated with Scale Insects

(2013) Manpreet K. Dhami et al.   PLoS One

Annuality of Central European deciduous tree leaves delimits community development of epifoliar pigmented fungi

(2012) Fabienne Flessa et al.   Fungal Ecology

New Meliolaceae from the Brazilian Atlantic forest 1. Species on hosts in the families Asteraceae, Burseraceae, Euphorbiaceae, Fabaceae and Sapindaceae

(2012) Danilo Batista Pinho et al.   MYCOLOGIA

Fungal pathogens of 'cat's claws 'from Brazil for biocontrol of Macfadyena unguis-cati

(2012) Meiriele da Silva et al.   MYCOTAXON

Towards an efficient phenotypic classification of fungal cultures from environmental samples using digital imagery

(2011) Andrea Pietrowski et al.   MYCOLOGICAL PROGRESS

Black mildew fungi (Meliolaceae) associated with Schinus terebinthifolius (Brazilian pepper tree) in Brazil

(2011) Davi M. de Macedo et al.   MYCOTAXON

First fungal community analyses of endophytic ascomycetes associated with Viscum album ssp. austriacum and its host Pinus sylvestris

(2010) Derek Peršoh et al.   Fungal Biology

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Fungal Phyllosphere Communities are Altered by Indirect Interactions Among Trophic Levels

(2009) Jose L. Perez et al.   MICROBIAL ECOLOGY

Selecting barcoding loci for plants: evaluation of seven candidate loci with species-level sampling in three divergent groups of land plants

(2009) MICHELLE L. HOLLINGSWORTH et al.   Molecular Ecology Resources