Bacterial and fungal endophyte communities differ in trees of natural versus wastewater-treatment wetlands

Inoculation with bacteria in floating treatment wetlands positively modulates the phytoremediation of oil field wastewater

(2018) Khadeeja Rehman et al.   JOURNAL OF HAZARDOUS MATERIALS

Phragmites australis — a helophytic grass — can establish successful partnership with phenol-degrading bacteria in a floating treatment wetland

(2018) Hamna Saleem et al.   SAUDI JOURNAL OF BIOLOGICAL SCIENCES

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

Water Level and Salinity Drive Community Structure of Culturable Baldcypress (Taxodium distichum) Endophytes in Southern Louisiana

(2018) Elizabeth R. Kimbrough et al.   WETLANDS

25 years of serving the community with ribosomal RNA gene reference databases and tools

(2017) Frank Oliver Glöckner et al.   JOURNAL OF BIOTECHNOLOGY

Insect Community Diversity Tracks Degradation and Recovery of a Wastewater Assimilation Marsh in Southeast Louisiana

(2017) M. O. Weller et al.   WETLANDS

Exploitation of Endophytic Bacteria to Enhance the Phytoremediation Potential of the Wetland Helophyte Juncus acutus

(2016) Evdokia Syranidou et al.   Frontiers in Microbiology

Nutrient-enhanced decomposition of plant biomass in a freshwater wetland

(2015) James E. Bodker et al.   AQUATIC BOTANY

System response, nutria herbivory, and vegetation recovery of a wetland receiving secondarily-treated effluent in coastal Louisiana

(2015) Gary P. Shaffer et al.   ECOLOGICAL ENGINEERING

Enhanced remediation of sewage effluent by endophyte-assisted floating treatment wetlands

(2015) Amna Ijaz et al.   ECOLOGICAL ENGINEERING

Shifts in Symbiotic Endophyte Communities of a Foundational Salt Marsh Grass following Oil Exposure from the Deepwater Horizon Oil Spill

(2015) Demetra Kandalepas et al.   PLoS One

Estimating diversity and entropy profiles via discovery rates of new species

(2015) Anne Chao et al.   Methods in Ecology and Evolution

Biocontrol mechanism by root-associated Bacillus amyloliquefaciens FZB42 – a review

(2015) Soumitra Paul Chowdhury et al.   Frontiers in Microbiology

Plant age and genotype affect the bacterial community composition in the tuber rhizosphere of field-grown sweet potato plants

(2014) Joana M. Marques et al.   FEMS MICROBIOLOGY ECOLOGY

Amelioration of high salinity stress damage by plant growth-promoting bacterial endophytes that contain ACC deaminase

(2014) Shimaila Ali et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Coverage-based rarefaction and extrapolation: standardizing samples by completeness rather than size

(2012) Anne Chao et al.   ECOLOGY

A variety of melanised root-associated fungi from the Sydney basin form endophytic associations with Trifolium subterraneum

(2012) T.T. Mukasa Mugerwa et al.   Fungal Ecology

The effects of fungal root endophytes on plant growth: a meta-analysis

(2012) Michael S. Mayerhofer et al.   MYCORRHIZA

Microbially Mediated Plant Functional Traits

(2011) Maren L. Friesen et al.   Annual Review of Ecology Evolution and Systematics

Hidden Fungi, Emergent Properties: Endophytes and Microbiomes

(2011) Andrea Porras-Alfaro et al.   Annual Review of Phytopathology

Growth rates of baldcypress (Taxodium distichum) seedlings in a treated effluent assimilation marsh

(2011) Chris J. Lundberg et al.   ECOLOGICAL ENGINEERING

A meta-analysis of plant responses to dark septate root endophytes

(2011) K. K. Newsham   NEW PHYTOLOGIST

Increased Fitness of Rice Plants to Abiotic Stress Via Habitat Adapted Symbiosis: A Strategy for Mitigating Impacts of Climate Change

(2011) Regina S. Redman et al.   PLoS One

Diverse Bacteria Inhabit Living Hyphae of Phylogenetically Diverse Fungal Endophytes

(2010) M. T. Hoffman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

How Abundant are Root-Colonizing Fungi in Southeastern Louisiana’s Degraded Marshes?

(2010) Demetra Kandalepas et al.   WETLANDS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Nutrient Removal and Loading Rate Analysis of Louisiana Forested Wetlands Assimilating Treated Municipal Effluent

(2009) Rachael Hunter et al.   ENVIRONMENTAL MANAGEMENT

Fungal endophytes: diversity and functional roles

(2009) R. J. Rodriguez et al.   NEW PHYTOLOGIST

Diversity and evolutionary origins of fungi associated with seeds of a neotropical pioneer tree: a case study for analysing fungal environmental samples

(2008) Jana M. U'Ren et al.