Grapevine Phyllosphere Community Analysis in Response to Elicitor Application against Powdery Mildew

Biological and molecular characterization of Chenopodium quinoa mitovirus 1 reveals a distinct sRNA response compared to cytoplasmic RNA viruses.

(2019) L. Nerva et al.   JOURNAL OF VIROLOGY

Direct comparison of culture-dependent and culture-independent molecular approaches reveal the diversity of fungal endophytic communities in stems of grapevine (Vitis vinifera)

(2018) Asha J. Dissanayake et al.   FUNGAL DIVERSITY

Application of laminarin and calcium oxide for the control of grape powdery mildew on Vitis vinifera cv. Moscato

(2018) Massimo Pugliese et al.   Journal of Plant Diseases and Protection

Phyllosphere microbiology: at the interface between microbial individuals and the plant host

(2018) Mitja N. P. Remus-Emsermann et al.   NEW PHYTOLOGIST

The importance of phyllosphere on plant functional ecology: a phyllo trait manifesto

(2018) Bruno H. P. Rosado et al.   NEW PHYTOLOGIST

Decoupled dimensions of leaf economic and anti-herbivore defense strategies in a tropical canopy tree community

(2018) K. McManus Chauvin et al.   OECOLOGIA

Metagenomic Approaches to Investigate the Contribution of the Vineyard Environment to the Quality of Wine Fermentation: Potentials and Difficulties

(2018) Irene Stefanini et al.   Frontiers in Microbiology

Effect of increased CO2 and temperature on plant diseases: a critical appraisal of results obtained in studies carried out under controlled environment facilities

(2018) Maria Lodovica Gullino et al.   JOURNAL OF PLANT PATHOLOGY

Dissecting interplays between Vitis vinifera L. and grapevine virus B (GVB) under field conditions

(2018) Walter Chitarra et al.   MOLECULAR PLANT PATHOLOGY

Leaf bacterial diversity mediates plant diversity and ecosystem function relationships

(2017) Isabelle Laforest-Lapointe et al.   NATURE

Trait covariance: the functional warp of plant diversity?

(2017) Anthony P. Walker et al.   NEW PHYTOLOGIST

Symbiosis: Viruses as Intimate Partners

(2017) Marilyn J. Roossinck et al.   Annual Review of Virology

Monitoring soil bacteria with community-level physiological profiles using Biolog™ ECO-plates in the Netherlands and Europe

(2016) Michiel Rutgers et al.   APPLIED SOIL ECOLOGY

Redefining the invertebrate RNA virosphere

(2016) Mang Shi et al.   NATURE

Uncovering Earth’s virome

(2016) David Paez-Espino et al.   NATURE

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Grapevine-virus-environment interactions: an intriguing puzzle to solve

(2016) Irene Perrone et al.   NEW PHYTOLOGIST

Identifying obstacles and ranking common biological control research priorities for Europe to manage most economically important pests in arable, vegetable and perennial crops

(2016) Jay Ram Lamichhane et al.   PEST MANAGEMENT SCIENCE

Impact of Alternative Fungicides on Grape Downy Mildew Control and Vine Growth and Development

(2016) Gianfranco Romanazzi et al.   PLANT DISEASE

The organic vineyard as a balanced ecosystem: Improved organic grape management and impacts on wine quality

(2016) Caroline Provost et al.   SCIENTIA HORTICULTURAE

Multiple approaches for the detection and characterization of viral and plasmid symbionts from a collection of marine fungi

(2016) L. Nerva et al.   VIRUS RESEARCH

Associations among Wine Grape Microbiome, Metabolome, and Fermentation Behavior Suggest Microbial Contribution to Regional Wine Characteristics

(2016) Nicholas A. Bokulich et al.   mBio

Leaf Treatments with a Protein-Based Resistance Inducer Partially Modify Phyllosphere Microbial Communities of Grapevine

(2016) Martina Cappelletti et al.   Frontiers in Plant Science

Fungicide resistance: facing the challenge – a review

(2016) D.W. Hollomon   PLANT PROTECTION SCIENCE

Novel functional microRNAs from virus-free and infected Vitis vinifera plants under water stress

(2016) Vitantonio Pantaleo et al.   Scientific Reports

Effects of chlortetracycline on soil microbial communities: Comparisons of enzyme activities to the functional diversity via Biolog EcoPlates™

(2015) Bei Liu et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

A new look at plant viruses and their potential beneficial roles in crops

(2015) Marilyn J. Roossinck   MOLECULAR PLANT PATHOLOGY

Disentangling the factors shaping microbiota composition across the plant holobiont

(2015) Stéphane Hacquard   NEW PHYTOLOGIST

Regional microbial signatures positively correlate with differential wine phenotypes: evidence for a microbial aspect to terroir

(2015) Sarah Knight et al.   Scientific Reports

Bacteria in a wood fungal disease: characterization of bacterial communities in wood tissues of esca-foliar symptomatic and asymptomatic grapevines

(2015) Emilie Bruez et al.   Frontiers in Microbiology

Sesquiterpene volatile organic compounds (VOCs) are markers of elicitation by sulfated laminarine in grapevine

(2015) Malik Chalal et al.   Frontiers in Plant Science

Resilience of the Natural Phyllosphere Microbiota of the Grapevine to Chemical and Biological Pesticides

(2014) Michele Perazzolli et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular characterization of divergent grapevine Pinot gris virus isolates and their detection in Slovak and Czech grapevines

(2014) Miroslav Glasa et al.   ARCHIVES OF VIROLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Analysis of the Diversity of Substrate Utilisation of Soil Bacteria Exposed to Cd and Earthworm Activity Using Generalised Additive Models

(2014) Selene Muñiz et al.   PLoS One

The Sulfated Laminarin Triggers a Stress Transcriptome before Priming the SA- and ROS-Dependent Defenses during Grapevine's Induced Resistance against Plasmopara viticola

(2014) Adrien Gauthier et al.   PLoS One

Unravelling the Diversity of Grapevine Microbiome

(2014) Cátia Pinto et al.   PLoS One

Bacterial Endophytic Communities in the Grapevine Depend on Pest Management

(2014) Andrea Campisano et al.   PLoS One

Elicitors as alternative strategy to pesticides in grapevine? Current knowledge on their mode of action from controlled conditions to vineyard

(2013) Bertrand Delaunois et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Progress in cultivation-independent phyllosphere microbiology

(2013) Thomas Müller et al.   FEMS MICROBIOLOGY ECOLOGY

New insights into the structure and function of phyllosphere microbiota through high-throughput molecular approaches

(2013) Gurdeep Rastogi et al.   FEMS MICROBIOLOGY LETTERS

Proteomics analysis suggests broad functional changes in potato leaves triggered by phosphites and a complex indirect mode of action against Phytophthora infestans

(2013) Sanghyun Lim et al.   Journal of Proteomics

Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

(2013) Björn D. Lindahl et al.   NEW PHYTOLOGIST

Leaf Microbiota of Strawberries as Affected by Biological Control Agents

(2013) Justine Sylla et al.   PHYTOPATHOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Microbial terroir for wine grapes

(2013) J. A. Gilbert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PNAS Plus: From the Cover: Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate

(2013) N. A. Bokulich et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The influence of different types of urban land use on soil microbial biomass and functional diversity in Beijing, China

(2013) D. Zhao et al.   SOIL USE AND MANAGEMENT

A virocentric perspective on the evolution of life

(2013) Eugene V Koonin et al.   Current Opinion in Virology

Effects of Systemic Pesticides Imidacloprid and Metalaxyl on the Phyllosphere of Pepper Plants

(2013) Constantinos Moulas et al.   Biomed Research International

Microbial Community-Level Physiological Profiles (CLPP) and herbicide mineralization potential in groundwater affected by agricultural land use

(2012) Gry Sander Janniche et al.   JOURNAL OF CONTAMINANT HYDROLOGY

Co-evolution between Grapevine rupestris stem pitting-associated virus and Vitis vinifera L. leads to decreased defence responses and increased transcription of genes related to photosynthesis

(2012) Giorgio Gambino et al.   JOURNAL OF EXPERIMENTAL BOTANY

Microbial life in the phyllosphere

(2012) Julia A. Vorholt   NATURE REVIEWS MICROBIOLOGY

Low susceptibility of grapevine infected by GLRaV-3 to late Plasmopara viticola infections: Towards understanding the phenomenon

(2012) Ombretta Repetto et al.   PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY

Quality control and preprocessing of metagenomic datasets

(2011) R. Schmieder et al.   BIOINFORMATICS

Are there alternatives to copper for controlling grapevine downy mildew in organic viticulture?

(2011) Silvia Dagostin et al.   CROP PROTECTION

Development and validation of a multiplex RT-PCR method for the simultaneous detection of five grapevine viroids

(2011) Mohammad Hajizadeh et al.   JOURNAL OF VIROLOGICAL METHODS

Production of Volatile Metabolites by Grape-Associated Microorganisms

(2010) Markus Verginer et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Produtos alternativos na proteção da videira contra o míldio

(2010) Vanessa Foresti Pereira et al.   PESQUISA AGROPECUARIA BRASILEIRA

Plant–microbe interactions promoting plant growth and health: perspectives for controlled use of microorganisms in agriculture

(2009) Gabriele Berg   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Phyllosphere microbiology with special reference to diversity and plant genotype

(2008) J.M. Whipps et al.   JOURNAL OF APPLIED MICROBIOLOGY

Virus infection improves drought tolerance

(2008) Ping Xu et al.   NEW PHYTOLOGIST