Genomic insights into the molecular mechanisms of a Pseudomonas strain significant in its survival in Kongsfjorden, an Arctic fjord

Algae−bacteria interactions that balance the planktonic microbiome

(2019) Emilio Cirri et al.   NEW PHYTOLOGIST

OrthoVenn2: a web server for whole-genome comparison and annotation of orthologous clusters across multiple species

(2019) Ling Xu et al.   NUCLEIC ACIDS RESEARCH

TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy

(2019) Jan P. Meier-Kolthoff et al.   Nature Communications

Bacterial siderophores in community and host interactions

(2019) Jos Kramer et al.   NATURE REVIEWS MICROBIOLOGY

Comparative Genomics of Pseudomonas sp. Strain SI-3 Associated With Macroalga Ulva prolifera, the Causative Species for Green Tide in the Yellow Sea

(2018) Huihui Fu et al.   Frontiers in Microbiology

Polyphasic approach revealed complex bacterial community structure and function in deep sea sediment of ultra-slow spreading Southwest Indian Ridge

(2018) Rupesh Kumar Sinha et al.   ECOLOGICAL INDICATORS

Uneven distribution of cobamide biosynthesis and dependence in bacteria predicted by comparative genomics

(2018) Amanda N. Shelton et al.   ISME Journal

Concentrations and origin of polychlorinated biphenyls (PCBs) and polycyclic aromatic hydrocarbons (PAHs) in sediments of western Spitsbergen fjords (Kongsfjorden, Hornsund, and Adventfjorden)

(2017) Anna Pouch et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Hybrid assembly of the large and highly repetitive genome ofAegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm

(2017) Aleksey V. Zimin et al.   GENOME RESEARCH

Lipid membrane modulation and pigmentation: A cryoprotection mechanism in Arctic pigmented bacteria

(2017) Archana Singh et al.   JOURNAL OF BASIC MICROBIOLOGY

Differences in free-living and particle-associated bacterial communities and their spatial variation in Kongsfjorden, Arctic

(2017) Anand Jain et al.   JOURNAL OF BASIC MICROBIOLOGY

Microbial production of vitamin B12: a review and future perspectives

(2017) Huan Fang et al.   Microbial Cell Factories

IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets

(2017) Claire Bertelli et al.   NUCLEIC ACIDS RESEARCH

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Microbial Surface Colonization and Biofilm Development in Marine Environments

(2015) Hongyue Dang et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Vitamin B 12 as a Modulator of Gut Microbial Ecology

(2014) Patrick H. Degnan et al.   Cell Metabolism

Interactions in multispecies biofilms: do they actually matter?

(2014) Mette Burmølle et al.   TRENDS IN MICROBIOLOGY

Host-specific adaptation governs the interaction of the marine diatom, Pseudo-nitzschia and their microbiota

(2013) Marilou P Sison-Mangus et al.   ISME Journal

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

(2013) Ross Overbeek et al.   NUCLEIC ACIDS RESEARCH

Interactions between Diatoms and Bacteria

(2012) S. A. Amin et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The PvdRT-OpmQ efflux pump controls the metal selectivity of the iron uptake pathway mediated by the siderophore pyoverdine in Pseudomonas aeruginosa

(2011) Mélissa Hannauer et al.   ENVIRONMENTAL MICROBIOLOGY

New roles for bacterial siderophores in metal transport and tolerance

(2011) Isabelle J. Schalk et al.   ENVIRONMENTAL MICROBIOLOGY

Spring bloom dynamics in Kongsfjorden, Svalbard: nutrients, phytoplankton, protozoans and primary production

(2011) Helene Hodal et al.   POLAR BIOLOGY

Sensor domains of two-component regulatory systems

(2010) Jonah Cheung et al.   CURRENT OPINION IN MICROBIOLOGY

Diversity of structure and function of response regulator output domains

(2010) Michael Y Galperin   CURRENT OPINION IN MICROBIOLOGY

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Pseudomonas pelagia sp. nov., isolated from a culture of the Antarctic green alga Pyramimonas gelidicola

(2009) C. Y. Hwang et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Stereospecificity of the Siderophore Pyochelin Outer Membrane Transporters in Fluorescent Pseudomonads

(2009) Françoise Hoegy et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Roles of pgaABCD Genes in Synthesis, Modification, and Export of the Escherichia coli Biofilm Adhesin Poly- -1,6-N-Acetyl-D-Glucosamine

(2008) Y. Itoh et al.   JOURNAL OF BACTERIOLOGY

Pseudomonas aeruginosa as a model microorganism for investigation of chemotactic behaviors in ecosystem

(2008) Junichi Kato et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Metal trafficking via siderophores in Gram-negative bacteria: Specificities and characteristics of the pyoverdine pathway

(2008) Isabelle J. Schalk   JOURNAL OF INORGANIC BIOCHEMISTRY