Cega: a single particle segmentation algorithm to identify moving particles in a noisy system

Accurate and rapid background estimation in single-molecule localization microscopy using the deep neural network BGnet

(2019) Leonhard Möckl et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Correcting Artifacts in Single Molecule Localization Microscopy Analysis Arising from Pixel Quantum Efficiency Differences in sCMOS Cameras

(2019) Hazen P. Babcock et al.   Scientific Reports

Opposing Kinesin and Myosin-I Motors Drive Membrane Deformation and Tubulation along Engineered Cytoskeletal Networks

(2018) Betsy B. McIntosh et al.   CURRENT BIOLOGY

Temporal Filtering to Improve Single Molecule Identification in High Background Samples

(2018) Alexander Reismann et al.   MOLECULES

TrackMate: An open and extensible platform for single-particle tracking

(2017) Jean-Yves Tinevez et al.   METHODS

Differential mast cell outcomes are sensitive to FcεRI-Syk binding kinetics

(2017) Samantha L. Schwartz et al.   MOLECULAR BIOLOGY OF THE CELL

Differentiation between Oppositely Oriented Microtubules Controls Polarized Neuronal Transport

(2017) Roderick P. Tas et al.   NEURON

Evaluating single molecule detection methods for microarrays with high dynamic range for quantitative single cell analysis

(2017) Ali Salehi-Reyhani   Scientific Reports

Simulated single molecule microscopy with SMeagol

(2016) Martin Lindén et al.   BIOINFORMATICS

“Calibration-on-the-spot”: How to calibrate an EMCCD camera from its images

(2016) Kim I. Mortensen et al.   Scientific Reports

Quantitative comparison of multiframe data association techniques for particle tracking in time-lapse fluorescence microscopy

(2015) Ihor Smal et al.   MEDICAL IMAGE ANALYSIS

Processive cytoskeletal motors studied with single-molecule fluorescence techniques

(2014) Vladislav Belyy et al.   FEBS LETTERS

Characterization and development of photoactivatable fluorescent proteins for single-molecule-based superresolution imaging

(2014) S. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Video-rate nanoscopy using sCMOS camera–specific single-molecule localization algorithms

(2013) Fang Huang et al.   NATURE METHODS

Optimized localization analysis for single-molecule tracking and super-resolution microscopy

(2010) Kim I Mortensen et al.   NATURE METHODS

Tracking algorithms chase down pathogens

(2009) Nicolas Chenouard et al.   Biotechnology Journal

Robust single-particle tracking in live-cell time-lapse sequences

(2008) Khuloud Jaqaman et al.   NATURE METHODS