Gene and transgenics nomenclature for the laboratory axolotl— Ambystoma mexicanum

The giant axolotl genome uncovers the evolution, scaling, and transcriptional control of complex gene loci

(2021) Siegfried Schloissnig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A guide to naming human non‐coding RNA genes

(2020) Ruth L Seal et al.   EMBO JOURNAL

A versatile depigmentation, clearing, and labeling method for exploring nervous system diversity

(2020) Marko Pende et al.   Science Advances

Guidelines for human gene nomenclature

(2020) Elspeth A. Bruford et al.   NATURE GENETICS

3D Visualization of Macromolecule Synthesis

(2020) Timothy J Duerr et al.   eLife

Broad applicability of a streamlined Ethyl Cinnamate-based clearing procedure

(2019) Wouter Masselink et al.   DEVELOPMENT

A chromosome-scale assembly of the axolotl genome

(2019) Jeramiah J. Smith et al.   GENOME RESEARCH

Model systems for regeneration: salamanders

(2019) Alberto Joven et al.   DEVELOPMENT

Pseudotyped baculovirus is an effective gene expression tool for studying molecular function during axolotl limb regeneration

(2018) Catarina R. Oliveira et al.   DEVELOPMENTAL BIOLOGY

The axolotl genome and the evolution of key tissue formation regulators

(2018) Sergej Nowoshilow et al.   NATURE

Single-cell analysis uncovers convergence of cell identities during axolotl limb regeneration

(2018) Tobias Gerber et al.   SCIENCE

Application and optimization of CRISPR–Cas9-mediated genome engineering in axolotl (Ambystoma mexicanum)

(2018) Ji-Feng Fei et al.   Nature Protocols

The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources

(2018) Leyla Ruzicka et al.   NUCLEIC ACIDS RESEARCH

Miniscule differences between sex chromosomes in the giant genome of a salamander

(2018) Melissa C. Keinath et al.   Scientific Reports

Xenbase: a genomic, epigenomic and transcriptomic model organism database

(2017) Kamran Karimi et al.   NUCLEIC ACIDS RESEARCH

Efficient gene knockin in axolotl and its use to test the role of satellite cells in limb regeneration

(2017) Ji-Feng Fei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of Mutant Genes and Introgressed Tiger Salamander DNA in the Laboratory Axolotl, Ambystoma mexicanum

(2017) M. Ryan Woodcock et al.   Scientific Reports

A Tissue-Mapped Axolotl De Novo Transcriptome Enables Identification of Limb Regeneration Factors

(2017) Donald M. Bryant et al.   Cell Reports

The FAIR Guiding Principles for scientific data management and stewardship

(2016) Mark D. Wilkinson et al.   Scientific Data

GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes

(2015) Patricia P. Chan et al.   NUCLEIC ACIDS RESEARCH

Highly efficient targeted mutagenesis in axolotl using Cas9 RNA-guided nuclease

(2014) G. P. Flowers et al.   DEVELOPMENT

Guidelines for the nomenclature of genetic elements in tunicate genomes

(2014) Alberto Stolfi et al.   GENESIS

Optimized axolotl (Ambystoma mexicanum) husbandry, breeding, metamorphosis, transgenesis and tamoxifen-mediated recombination

(2014) Shahryar Khattak et al.   Nature Protocols

CRISPR-Mediated Genomic Deletion of Sox2 in the Axolotl Shows a Requirement in Spinal Cord Neural Stem Cell Amplification during Tail Regeneration

(2014) Ji-Feng Fei et al.   Stem Cell Reports

Foamy virus for efficient gene transfer in regeneration studies

(2013) Shahryar Khattak et al.   BMC DEVELOPMENTAL BIOLOGY

Pseudotyped retroviruses for infecting axolotl in vivo and in vitro

(2013) J. L. Whited et al.   DEVELOPMENT

Developing a community-based genetic nomenclature for anole lizards

(2011) Kenro Kusumi et al.   BMC GENOMICS

Origin of amphibian and avian chromosomes by fission, fusion, and retention of ancestral chromosomes

(2011) Stephen R. Voss et al.   GENOME RESEARCH

The chicken gene nomenclature committee report

(2009) David W Burt et al.   BMC GENOMICS

Gene nomenclature guidelines for the planarianSchmidtea mediterranea

(2008) Peter W. Reddien et al.   DEVELOPMENTAL DYNAMICS