Soil Bacterial Diversity Is Positively Correlated with Decomposition Rates during Early Phases of Maize Litter Decomposition

Shifts in reclamation management strategies shape the role of exopolysaccharide and lipopolysaccharide‐producing bacteria during soil formation

(2020) Miljenka Vuko et al.   Microbial Biotechnology

Microbial utilization of rice root residue-derived carbon explored by DNA stable-isotope probing

(2020) Tengfei Guo et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Linking ecology and systematics of acidobacteria: Distinct habitat preferences of the Acidobacteriia and Blastocatellia in tundra soils

(2020) Anastasia A. Ivanova et al.   PLoS One

Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants

(2020) Munusamy Madhaiyan et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Soil biodiversity enhances the persistence of legumes under climate change

(2020) Gaowen Yang et al.   NEW PHYTOLOGIST

Litter carbon and nutrient chemistry control the magnitude of soil priming effect

(2019) Lin Chao et al.   FUNCTIONAL ECOLOGY

SOIL MICROBIAL DIVERSITY DURING 30 YEARS OF GRASSLAND RESTORATION ON THE LOESS PLATEAU: TIGHT LINKAGES WITH PLANT DIVERSITY

(2019) Yanqing Guo et al.   LAND DEGRADATION & DEVELOPMENT

Microbial succession on decomposing root litter in a drought-prone Scots pine forest

(2019) Claude Herzog et al.   ISME Journal

Relationship between enantioselective transformation of racemic quizalofop‐ethyl and soil bacterial diversity: A destructive approach

(2019) Qing Zhou et al.   CHIRALITY

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Relationship between the chemical structure of straw and composition of main microbial groups during the decomposition of wheat and maize straws as affected by soil texture

(2019) Dandan Li et al.   BIOLOGY AND FERTILITY OF SOILS

Succession of Microbial Decomposers Is Determined by Litter Type, but Site Conditions Drive Decomposition Rates

(2019) A. Buresova et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A single Thaumarchaeon drives nitrification in deep oligotrophic Lake Constance

(2019) Janina Herber et al.   ENVIRONMENTAL MICROBIOLOGY

Vicinamibacteraceae fam. nov., the first described family within the subdivision 6 Acidobacteria

(2018) Katharina J. Huber et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

High Microbial Diversity Promotes Soil Ecosystem Functioning

(2018) Pierre-Alain Maron et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil sterilization, pathogen and antagonist concentration affect biological control of Fusarium wilt of cape gooseberry by Bacillus velezensis Bs006

(2018) C. A. Moreno-Velandia et al.   PLANT AND SOIL

Insight Into Metabolic Versatility of an Aromatic Compounds-Degrading Arthrobacter sp. YC-RL1

(2018) Lei Ren et al.   Frontiers in Microbiology

Luteitalea pratensis gen. nov., sp. nov. a new member of subdivision 6 Acidobacteria isolated from temperate grassland soil

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Structural and functional rearrangements in the cells of actinobacteria Microbacterium foliorum BN52 during transition from vegetative growth to a dormant state and during germination of dormant forms

(2017) I. P. Solyanikova et al.   MICROBIOLOGY

Seasonal variation and distribution of total and active microbial community of β-glucosidase encoding genes in coniferous forest soil

(2017) Shamina Imran Pathan et al.   SOIL BIOLOGY & BIOCHEMISTRY

Legacy Effects on the Recovery of Soil Bacterial Communities from Extreme Temperature Perturbation

(2017) Stephanie D. Jurburg et al.   Frontiers in Microbiology

Eco-enzymatic stoichiometry and enzymatic vectors reveal differential C, N, P dynamics in decaying litter along a land-use gradient

(2016) Nicolas Fanin et al.   BIOGEOCHEMISTRY

Least-Squares Means: TheRPackagelsmeans

(2016) Russell V. Lenth   Journal of Statistical Software

Life in leaf litter: novel insights into community dynamics of bacteria and fungi during litter decomposition

(2016) Witoon Purahong et al.   MOLECULAR ECOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Bacteria dominate the short-term assimilation of plant-derived N in soil

(2016) Robert Starke et al.   SOIL BIOLOGY & BIOCHEMISTRY

Network analysis reveals functional redundancy and keystone taxa amongst bacterial and fungal communities during organic matter decomposition in an arable soil

(2016) Samiran Banerjee et al.   SOIL BIOLOGY & BIOCHEMISTRY

Host genotype and age shape the leaf and root microbiomes of a wild perennial plant

(2016) Maggie R. Wagner et al.   Nature Communications

Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium

(2016) Alexander B. Chase et al.   Frontiers in Microbiology

Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone

(2016) Cristina N. Butterfield et al.   PeerJ

phoDAlkaline Phosphatase Gene Diversity in Soil

(2015) Sabine A. Ragot et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A rapid flow cytometry method to assess bacterial abundance in agricultural soil

(2015) Mélanie Bressan et al.   APPLIED SOIL ECOLOGY

Effect of added nitrogen on plant litter decomposition depends on initial soil carbon and nitrogen stoichiometry

(2015) Damien Finn et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil characteristics determine soil carbon and nitrogen availability during leaf litter decomposition regardless of litter quality

(2015) Manuel Delgado-Baquerizo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Trophic network architecture of root-associated bacterial communities determines pathogen invasion and plant health

(2015) Zhong Wei et al.   Nature Communications

Differential Response of Acidobacteria Subgroups to Forest-to-Pasture Conversion and Their Biogeographic Patterns in the Western Brazilian Amazon

(2015) Acacio A. Navarrete et al.   Frontiers in Microbiology

Crop monoculture rather than agriculture reduces the spatial turnover of soil bacterial communities at a regional scale

(2014) Eva L. M. Figuerola et al.   ENVIRONMENTAL MICROBIOLOGY

Soil bacterial community composition altered by increased nutrient availability in Arctic tundra soils

(2014) Akihiro Koyama et al.   Frontiers in Microbiology

Stimulation of Different Functional Groups of Bacteria by Various Plant Residues as a Driver of Soil Priming Effect

(2013) Noémie Pascault et al.   ECOSYSTEMS

Exploring links between pH and bacterial community composition in soils from the Craibstone Experimental Farm

(2013) Andrea K. Bartram et al.   FEMS MICROBIOLOGY ECOLOGY

The (d)evolution of methanotrophy in the Beijerinckiaceae—a comparative genomics analysis

(2013) Ivica Tamas et al.   ISME Journal

Leaf Litter Mixtures Alter Microbial Community Development: Mechanisms for Non-Additive Effects in Litter Decomposition

(2013) Samantha K. Chapman et al.   PLoS One

Strong functional stability of soil microbial communities under semiarid Mediterranean conditions and subjected to long-term shifts in baseline precipitation

(2013) J. Curiel Yuste et al.   SOIL BIOLOGY & BIOCHEMISTRY

Diversity of free-living nitrogen-fixing bacteria associated with Korean paddy fields

(2012) Md. Rashedul Islam et al.   ANNALS OF MICROBIOLOGY

Environmental Factors Affect Acidobacterial Communities below the Subgroup Level in Grassland and Forest Soils

(2012) Astrid Naether et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil microbial diversity affects soil organic matter decomposition in a silty grassland soil

(2012) Karen Baumann et al.   BIOGEOCHEMISTRY

The origin of litter chemical complexity during decomposition

(2012) Kyle Wickings et al.   ECOLOGY LETTERS

A review of diversity-stability relationship of soil microbial community: What do we not know?

(2012) Huan Deng   JOURNAL OF ENVIRONMENTAL SCIENCES

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Microbial diversity determines the invasion of soil by a bacterial pathogen

(2012) J. D. van Elsas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temporal dynamics of microbial communities on decomposing leaf litter of 10 plant species in relation to decomposition rate

(2012) Sarah R. Bray et al.   SOIL BIOLOGY & BIOCHEMISTRY

Improved protocol for the simultaneous extraction and column-based separation of DNA and RNA from different soils

(2011) Stefanie Töwe et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Bayesian community-wide culture-independent microbial source tracking

(2011) Dan Knights et al.   NATURE METHODS

Comparison of Barley Succession and Take-All Disease as Environmental Factors Shaping the Rhizobacterial Community during Take-All Decline

(2010) K. Schreiner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Stoichiometric controls on carbon, nitrogen, and phosphorus dynamics in decomposing litter

(2010) Stefano Manzoni et al.   ECOLOGICAL MONOGRAPHS

Abundances and potential activities of nitrogen cycling microbial communities along a chronosequence of a glacier forefield

(2010) Robert Brankatschk et al.   ISME Journal

Members of soil bacterial communities sensitive to tillage and crop rotation

(2010) Chuntao Yin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Diazotrophic endophytes of native black cottonwood and willow

(2010) Sharon L. Doty et al.   SYMBIOSIS

Biological nitrogen fixation in maize (Zea mays L.) by 15N isotope-dilution and identification of associated culturable diazotrophs

(2008) Adriana Montañez et al.   BIOLOGY AND FERTILITY OF SOILS

Plant species traits are the predominant control on litter decomposition rates within biomes worldwide

(2008) William K. Cornwell et al.   ECOLOGY LETTERS

Effect of gamma-sterilization and autoclaving on soil organic matter structure as studied by solid state NMR, UV and fluorescence spectroscopy

(2008) A. E. Berns et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

N : P ratios influence litter decomposition and colonization by fungi and bacteria in microcosms

(2008) Sabine Güsewell et al.   FUNCTIONAL ECOLOGY

Molecular C dynamics downstream: The biochemical decomposition sequence and its impact on soil organic matter structure and function

(2008) A. Stuart Grandy et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Labile and recalcitrant plant fractions are utilised by distinct microbial communities in soil: Independent of the presence of roots and mycorrhizal fungi

(2008) Eric Paterson et al.   SOIL BIOLOGY & BIOCHEMISTRY