Functional metagenomics reveals differential chitin degradation and utilization features across free-living and host-associated marine microbiomes
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Title
Functional metagenomics reveals differential chitin degradation and utilization features across free-living and host-associated marine microbiomes
Authors
Keywords
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Journal
Microbiome
Volume 9, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-02-15
DOI
10.1186/s40168-020-00970-2
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- (2019) Sandra G. Silva et al. ENVIRONMENTAL MICROBIOLOGY
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- (2018) Cristina Díez-Vives et al. Environmental Microbiology Reports
- The sponge holobiont in a changing ocean: from microbes to ecosystems
- (2018) L. Pita et al. Microbiome
- Host-microbe interactions in octocoral holobionts - recent advances and perspectives
- (2018) Jeroen A. J. M. van de Water et al. Microbiome
- Bioactive Secondary Metabolites from Octocoral-Associated Microbes—New Chances for Blue Growth
- (2018) Inês Raimundo et al. Marine Drugs
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- (2017) Yuki Yoshioka et al. PeerJ
- Biological Potential of Chitinolytic Marine Bacteria
- (2016) Sara Paulsen et al. Marine Drugs
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data
- (2016) Daniel H. Huson et al. PLoS Computational Biology
- Chitosan as a starting material for wound healing applications
- (2015) V. Patrulea et al. EUROPEAN JOURNAL OF PHARMACEUTICS AND BIOPHARMACEUTICS
- EBI metagenomics in 2016 - an expanding and evolving resource for the analysis and archiving of metagenomic data
- (2015) Alex Mitchell et al. NUCLEIC ACIDS RESEARCH
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- (2015) Marcin Wysokowski et al. Polymers
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- (2013) S. Kawaichi et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
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- (2013) Ross Overbeek et al. NUCLEIC ACIDS RESEARCH
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- (2013) Sara Beier et al. Frontiers in Microbiology
- The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools
- (2012) Andreas Wilke et al. BMC BIOINFORMATICS
- WebMGA: a customizable web server for fast metagenomic sequence analysis
- (2011) Sitao Wu et al. BMC GENOMICS
- Marine sponges and their microbial symbionts: love and other relationships
- (2011) Nicole S. Webster et al. ENVIRONMENTAL MICROBIOLOGY
- The Importance of Chitin in the Marine Environment
- (2011) Claudiana P. Souza et al. MARINE BIOTECHNOLOGY
- Global Phylogeography of Chitinase Genes in Aquatic Metagenomes
- (2010) Sara Beier et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- FragGeneScan: predicting genes in short and error-prone reads
- (2010) Mina Rho et al. NUCLEIC ACIDS RESEARCH
- Particulate organic matter as a food source for a coral reef sponge
- (2009) E. Hadas et al. JOURNAL OF EXPERIMENTAL BIOLOGY
- The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
- (2008) F Meyer et al. BMC BIOINFORMATICS
- The RAST Server: Rapid Annotations using Subsystems Technology
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- Characterization of Antifungal Chitinase from Marine Streptomyces sp. DA11 Associated with South China Sea Sponge Craniella Australiensis
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