Effects of sample handling and cultivation bias on the specificity of bacterial communities in keratose marine sponges

Integration of Culture-Based and Molecular Analysis of a Complex Sponge-Associated Bacterial Community

(2014) Naomi F. Montalvo et al.   PLoS One

High-throughput sequencing shows inconsistent results with a microscope-based analysis of the soil prokaryotic community

(2014) Masayuki Ushio et al.   SOIL BIOLOGY & BIOCHEMISTRY

Diversity of the candidate phylum Poribacteria in the marine sponge Aplysina fulva

(2013) C.C.P. Hardoim et al.   BRAZILIAN JOURNAL OF MICROBIOLOGY

Molecular richness and biotechnological potential of bacteria cultured from Irciniidae sponges in the north-east Atlantic

(2013) Ana I.S. Esteves et al.   FEMS MICROBIOLOGY ECOLOGY

Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges

(2013) Janine Kamke et al.   ISME Journal

Metatranscriptomics of the marine sponge Geodia barretti: tackling phylogeny and function of its microbial community

(2012) Regina Radax et al.   ENVIRONMENTAL MICROBIOLOGY

Metaproteogenomic analysis of a community of sponge symbionts

(2012) Michael Liu et al.   ISME Journal

Genomic Mining for Novel FADH2-Dependent Halogenases in Marine Sponge-Associated Microbial Consortia

(2012) Kristina Bayer et al.   MARINE BIOTECHNOLOGY

Genomic insights into the marine sponge microbiome

(2012) Ute Hentschel et al.   NATURE REVIEWS MICROBIOLOGY

Phylogenetically and Spatially Close Marine Sponges Harbour Divergent Bacterial Communities

(2012) Cristiane C. P. Hardoim et al.   PLoS One

Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts

(2012) L. Fan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple Approaches To Enhance the Cultivability of Bacteria Associated with the Marine SpongeHaliclona(gellius) sp.

(2011) Detmer Sipkema et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms

(2011) Rachel L. Simister et al.   ENVIRONMENTAL MICROBIOLOGY

Marine sponges and their microbial symbionts: love and other relationships

(2011) Nicole S. Webster et al.   ENVIRONMENTAL MICROBIOLOGY

A specific mix of generalists: bacterial symbionts in Mediterranean Ircinia spp.

(2011) Patrick M. Erwin et al.   FEMS MICROBIOLOGY ECOLOGY

Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges

(2011) Susanne Schmitt et al.   ISME Journal

Phylogenetic Diversity of Bacteria Associated with the Marine Sponge Gelliodes carnosa Collected from the Hainan Island Coastal Waters of the South China Sea

(2011) Chang-Qing Li et al.   MICROBIAL ECOLOGY

Acidobacteria, Rubrobacteridae and Chloroflexi are abundant among very slow-growing and mini-colony-forming soil bacteria

(2010) Kathryn E. R. Davis et al.   ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea

(2010) On On Lee et al.   ISME Journal

Functional genomic signatures of sponge bacteria reveal unique and shared features of symbiosis

(2010) Torsten Thomas et al.   ISME Journal

Single-cell genomics reveals the lifestyle of Poribacteria, a candidate phylum symbiotically associated with marine sponges

(2010) Alexander Siegl et al.   ISME Journal

Survival of Escherichia coli in the environment: fundamental and public health aspects

(2010) Jan Dirk van Elsas et al.   ISME Journal

Evaluating methods for the preservation and extraction of DNA and RNA for analysis of microbial communities in marine sponges

(2010) Rachel L. Simister et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Marine Drugs from Sponge-Microbe Association—A Review

(2010) Tresa Remya A. Thomas et al.   Marine Drugs

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Taking Root: Enduring Effect of Rhizosphere Bacterial Colonization in Mangroves

(2010) Newton C. M. Gomes et al.   PLoS One

Diversity of Bacteria in the Marine Sponge Aplysina fulva in Brazilian Coastal Waters

(2009) C. C. P. Hardoim et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts

(2009) Nicole S. Webster et al.   ENVIRONMENTAL MICROBIOLOGY

Polyketide synthases of bacterial symbionts in sponges – Evolution-based applications in natural products research

(2009) Thomas Hochmuth et al.   PHYTOCHEMISTRY

PKS and NRPS gene clusters from microbial symbiont cells of marine sponges by whole genome amplification

(2009) Alexander Siegl et al.   Environmental Microbiology Reports

Genomics of pyrrolnitrin biosynthetic loci: evidence for conservation and whole-operon mobility within Gram-negative bacteria

(2008) Rodrigo Costa et al.   ENVIRONMENTAL MICROBIOLOGY

In situ analysis of the bacterial community associated with the reindeer lichen Cladonia arbuscula reveals predominance of Alphaproteobacteria

(2008) Massimiliano Cardinale et al.   FEMS MICROBIOLOGY ECOLOGY