Effects of Antibiotics upon the Gut Microbiome: A Review of the Literature

Potential Elimination of Human Gut Resistome by Exploiting the Benefits of Functional Foods

(2020) Christina Tsigalou et al.   Frontiers in Microbiology

The antibiotic bedaquiline activates host macrophage innate immune resistance to bacterial infection

(2020) Alexandre Giraud-Gatineau et al.   eLife

Social Stress Increases Vulnerability to High-Fat Diet-Induced Insulin Resistance by Enhancing Neutrophil Elastase Activity in Adipose Tissue

(2020) Shinichiro Motoyama et al.   Cells

The Role of the Microbiota–Gut–Brain Axis and Antibiotics in ALS and Neurodegenerative Diseases

(2020) Mark Obrenovich et al.   Microorganisms

Sputum Neutrophil Elastase associates with microbiota and P. aeruginosa in bronchiectasis

(2020) Martina Oriano et al.   EUROPEAN RESPIRATORY JOURNAL

Rapamycin and MCC950 modified gut microbiota in experimental autoimmune encephalomyelitis mouse by brain gut axis

(2020) Ling Xu et al.   LIFE SCIENCES

The Relationship Between Gut Microbiota and Inflammatory Diseases: The Role of Macrophages

(2020) Ji Wang et al.   Frontiers in Microbiology

Cross-omics analysis revealed gut microbiome-related metabolic pathways underlying atherosclerosis development after antibiotics treatment

(2020) Ben Arpad Kappel et al.   Molecular Metabolism

The Role of Gut Microbiota Biomodulators on Mucosal Immunity and Intestinal Inflammation

(2020) Chiara Amoroso et al.   Cells

Erythromycin inhibits neutrophilic inflammation and mucosal disease by upregulating DEL-1

(2020) Tomoki Maekawa et al.   JCI Insight

A human gut bacterial genome and culture collection for improved metagenomic analyses

(2019) Samuel C. Forster et al.   NATURE BIOTECHNOLOGY

A new genomic blueprint of the human gut microbiota

(2019) Alexandre Almeida et al.   NATURE

Targeting strategies for chemotherapy-induced peripheral neuropathy: does gut microbiota play a role?

(2019) Shanshan Zhong et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Modification of the gut microbiome to combat neurodegeneration

(2019) Andrew Octavian Sasmita   REVIEWS IN THE NEUROSCIENCES

Impact of antibiotic treatment and host innate immune pressure on enterococcal adaptation in the human bloodstream

(2019) Daria Van Tyne et al.   Science Translational Medicine

Inorganic nitrate prevents the loss of tight junction proteins and modulates inflammatory events induced by broad-spectrum antibiotics: A role for intestinal microbiota?

(2019) Bárbara S. Rocha et al.   NITRIC OXIDE-BIOLOGY AND CHEMISTRY

Effect of the Antimicrobial Peptide LL-37 on Gene Expression of Chemokines and 29 Toll-like Receptor-Associated Proteins in Human Gingival Fibroblasts Under Stimulation with Porphyromonas gingivalis Lipopolysaccharide

(2019) Megumi Inomata et al.   Probiotics and Antimicrobial Proteins

Dominant Role of the Gut Microbiota in Chemotherapy Induced Neuropathic Pain

(2019) Chandran Ramakrishna et al.   Scientific Reports

Antibiotic Resistance in Plant-Pathogenic Bacteria

(2018) George W. Sundin et al.   Annual Review of Phytopathology

Antibiotic resistance and relevance to general dental practice in Australia

(2018) Leanne Teoh et al.   AUSTRALIAN DENTAL JOURNAL

Probiotics to Prevent Clostridium difficile Infection in Patients Receiving Antibiotics

(2018) Joshua Z. Goldenberg et al.   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Neutrophil extracellular traps are associated with disease severity and microbiota diversity in patients with chronic obstructive pulmonary disease

(2018) Alison J. Dicker et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

The Antimicrobial Peptide CRAMP Is Essential for Colon Homeostasis by Maintaining Microbiota Balance

(2018) Teizo Yoshimura et al.   JOURNAL OF IMMUNOLOGY

Antimicrobial Resistance

(2018) Edward Joel Septimus   MEDICAL CLINICS OF NORTH AMERICA

Structural basis for the role of serine-rich repeat proteins fromLactobacillus reuteriin gut microbe–host interactions

(2018) Saannya Sequeira et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

From the Bottom-Up: Chemotherapy and Gut-Brain Axis Dysregulation

(2018) Juliana E. Bajic et al.   Frontiers in Behavioral Neuroscience

Current Insights in Microbiome Shifts in Sjogren’s Syndrome and Possible Therapeutic Interventions

(2018) Christina Tsigalou et al.   Frontiers in Immunology

Immunomodulatory tetracyclines shape the intestinal inflammatory response inducing mucosal healing and resolution.

(2018) J Garrido-Mesa et al.   BRITISH JOURNAL OF PHARMACOLOGY

Early life colonization of the human gut: microbes matter everywhere

(2018) Katri Korpela et al.   CURRENT OPINION IN MICROBIOLOGY

Clarithromycin Enhances the Antibacterial Activity and Wound Healing Capacity in Type 2 Diabetes Mellitus by Increasing LL-37 Load on Neutrophil Extracellular Traps

(2018) Athanasios Arampatzioglou et al.   Frontiers in Immunology

LL-37 treatment on human peripheral blood mononuclear cells modulates immune response and promotes regulatory T-cells generation

(2018) Dominique Sternadt Alexandre-Ramos et al.   BIOMEDICINE & PHARMACOTHERAPY

Neutrophils Restrict Tumor-Associated Microbiota to Reduce Growth and Invasion of Colon Tumors in Mice

(2018) Daniel Triner et al.   GASTROENTEROLOGY

Interleukin-17/interleukin-17 receptor axis elicits intestinal neutrophil migration, restrains gut dysbiosis and lipopolysaccharide translocation in high-fat diet-induced metabolic syndrome model

(2018) Malena M. Pérez et al.   IMMUNOLOGY

Antibiotic resistance: a rundown of a global crisis

(2018) Bilal Aslam et al.   Infection and Drug Resistance

Prediction of the intestinal resistome by a three-dimensional structure-based method

(2018) Etienne Ruppé et al.   Nature Microbiology

Effect of Lactobacillus on body weight and body fat in overweight subjects: a systematic review of randomized controlled clinical trials

(2017) L Crovesy et al.   INTERNATIONAL JOURNAL OF OBESITY

Gut microbiota — at the intersection of everything?

(2017) Patrice D. Cani   Nature Reviews Gastroenterology & Hepatology

Clinical Evidence for the Microbiome in Inflammatory Diseases

(2017) Ann E. Slingerland et al.   Frontiers in Immunology

Blood Microbiome Quantity and the Hyperdynamic Circulation in Decompensated Cirrhotic Patients

(2017) Daniela Traykova et al.   PLoS One

Are We Really Vastly Outnumbered? Revisiting the Ratio of Bacterial to Host Cells in Humans

(2016) Ron Sender et al.   CELL

Routine Use of Probiotics in Preterm Infants: Longitudinal Impact on the Microbiome and Metabolome

(2016) Bashir Abdulkadir et al.   Neonatology

When pathogenic bacteria meet the intestinal microbiota

(2016) Nathalie Rolhion et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity

(2016) Alexandra Zhernakova et al.   SCIENCE

Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability

(2016) Moran Yassour et al.   Science Translational Medicine

Diminution of the gut resistome after a gut microbiota-targeted dietary intervention in obese children

(2016) Guojun Wu et al.   Scientific Reports

The New Era of Treatment for Obesity and Metabolic Disorders: Evidence and Expectations for Gut Microbiome Transplantation

(2016) Thilini N. Jayasinghe et al.   Frontiers in Cellular and Infection Microbiology

Chemical and Stress Resistances of Clostridium difficile Spores and Vegetative Cells

(2016) Adrianne N. Edwards et al.   Frontiers in Microbiology

Immunomodulatory Role of Clarithromycin in Acinetobacter baumannii Infection via Formation of Neutrophil Extracellular Traps

(2015) Theocharis Konstantinidis et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Intestinal Microbiota Development in Preterm Neonates and Effect of Perinatal Antibiotics

(2015) Silvia Arboleya et al.   JOURNAL OF PEDIATRICS

Neutrophil ageing is regulated by the microbiome

(2015) Dachuan Zhang et al.   NATURE

Activation of HIF-1α and LL-37 by commensal bacteria inhibits Candida albicans colonization

(2015) Di Fan et al.   NATURE MEDICINE

Ceftriaxone ameliorates tau pathology and cognitive decline via restoration of glial glutamate transporter in a mouse model of Alzheimer's disease

(2015) Joannee Zumkehr et al.   NEUROBIOLOGY OF AGING

Clostridium difficile Infection

(2015) Daniel A. Leffler et al.   NEW ENGLAND JOURNAL OF MEDICINE

Same Exposure but Two Radically Different Responses to Antibiotics: Resilience of the Salivary Microbiome versus Long-Term Microbial Shifts in Feces

(2015) E. Zaura et al.   mBio

Human microbiomes and their roles in dysbiosis, common diseases, and novel therapeutic approaches

(2015) José E. Belizário et al.   Frontiers in Microbiology

Disruption of the Gut Microbiome: Clostridium difficile Infection and the Threat of Antibiotic Resistance

(2015) Priscilla Johanesen et al.   Genes

Dietary Modulation of Gut Microbiota Contributes to Alleviation of Both Genetic and Simple Obesity in Children

(2015) Chenhong Zhang et al.   EBioMedicine

Microbiome Changes in Healthy Volunteers Treated with GSK1322322, a Novel Antibiotic Targeting Bacterial Peptide Deformylase

(2014) Seda Arat et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Use of antibiotics in rural and urban regions in the Netherlands: an observational drug utilization study

(2014) Josta de Jong et al.   BMC PUBLIC HEALTH

Altering the Intestinal Microbiota during a Critical Developmental Window Has Lasting Metabolic Consequences

(2014) Laura M. Cox et al.   CELL

Role of the Microbiota in Immunity and Inflammation

(2014) Yasmine Belkaid et al.   CELL

Exercise and associated dietary extremes impact on gut microbial diversity

(2014) Siobhan F Clarke et al.   GUT

Effects of selective digestive decontamination (SDD) on the gut resistome

(2014) Elena Buelow et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Antibiotics and the gut microbiota

(2014) Sheetal R. Modi et al.   JOURNAL OF CLINICAL INVESTIGATION

Minireview: Gut Microbiota: The Neglected Endocrine Organ

(2014) Gerard Clarke et al.   MOLECULAR ENDOCRINOLOGY

Antibiotics in early life and obesity

(2014) Laura M. Cox et al.   Nature Reviews Endocrinology

Short-Term Effect of Antibiotics on Human Gut Microbiota

(2014) Suchita Panda et al.   PLoS One

The Placenta Harbors a Unique Microbiome

(2014) K. Aagaard et al.   Science Translational Medicine

Pathogenic microbes, the microbiome, and Alzheimer’s disease (AD)

(2014)   Frontiers in Aging Neuroscience

Use of antibiotics as feed additives: a burning question

(2014) Madhab K. Chattopadhyay   Frontiers in Microbiology

Seven Ways to Preserve the Miracle of Antibiotics

(2013) J. G. Bartlett et al.   CLINICAL INFECTIOUS DISEASES

Impact of oral vancomycin on gut microbiota, bile acid metabolism, and insulin sensitivity

(2013) Anne Vrieze et al.   JOURNAL OF HEPATOLOGY

Colonic microbiome is altered in alcoholism

(2012) Ece A. Mutlu et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Antibiotics in early life alter the murine colonic microbiome and adiposity

(2012) Ilseung Cho et al.   NATURE

Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples

(2012) Nicola Segata et al.   GENOME BIOLOGY

Human microbial ecology: Lactobacilli, probiotics, selective decontamination

(2011) Marika Mikelsaar   ANAEROBE

Immunology and probiotic impact of the newborn and young children intestinal microflora

(2011) Eugenia Bezirtzoglou et al.   ANAEROBE

Immunosuppressive Activity of Florfenicol on the Immune Responses in Mice

(2011) Guan Shuang et al.   IMMUNOLOGICAL INVESTIGATIONS

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Composition and energy harvesting capacity of the gut microbiota: relationship to diet, obesity and time in mouse models

(2010) E F Murphy et al.   GUT

Dominant and diet-responsive groups of bacteria within the human colonic microbiota

(2010) Alan W Walker et al.   ISME Journal

Origins and Evolution of Antibiotic Resistance

(2010) J. Davies et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Long-term impacts of antibiotic exposure on the human intestinal microbiota

(2010) C. Jernberg et al.   MICROBIOLOGY-SGM

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

The intestinal anti-inflammatory effect of minocycline in experimental colitis involves both its immunomodulatory and antimicrobial properties

(2010) Natividad Garrido-Mesa et al.   PHARMACOLOGICAL RESEARCH

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Succession of microbial consortia in the developing infant gut microbiome

(2010) J. E. Koenig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Decontamination of the Digestive Tract and Oropharynx in ICU Patients

(2009) A.M.G.A. de Smet et al.   NEW ENGLAND JOURNAL OF MEDICINE

High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota

(2008) E G Zoetendal et al.   GUT

Is meconium from healthy newborns actually sterile?

(2008) Esther Jiménez et al.   RESEARCH IN MICROBIOLOGY