Trans-Acting Effectors Versus RNA Cis-Elements: A Tightly Knit Regulatory Mesh

Riboswitch regulation mechanisms: RNA, metabolites and regulatory proteins

(2020) Anne-Sophie Vézina Bédard et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Feeling the heat at the millennium: thermosensors playing with fire

(2020) Pierre Mandin et al.   MOLECULAR MICROBIOLOGY

Lipid oligonucleotides as a new strategy for tackling the antibiotic resistance

(2020) Tina Kauss et al.   Scientific Reports

Translation inhibition from a distance: The small RNA SgrS silences a ribosomal protein S1‐dependent enhancer

(2020) Muhammad S. Azam et al.   MOLECULAR MICROBIOLOGY

An RNA biology perspective on species‐specific programmable RNA antibiotics

(2020) Jörg Vogel   MOLECULAR MICROBIOLOGY

Selective translation by alternative bacterial ribosomes

(2020) Yu-Xiang Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A tRNA half modulates translation as stress response in Trypanosoma brucei

(2019) Roger Fricker et al.   Nature Communications

The sRNA PinT contributes to PhoP-mediated regulation of the SPI1 T3SS in Salmonella enterica serovar Typhimurium

(2019) Kyungsub Kim et al.   JOURNAL OF BACTERIOLOGY

The sRNA DicF integrates oxygen sensing to enhance enterohemorrhagicEscherichia colivirulence via distinctive RNA control mechanisms

(2019) Elizabeth M. Melson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The ribosomal protein S1-dependent standby site in tisB mRNA consists of a single-stranded region and a 5′ structure element

(2019) Cédric Romilly et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Riboswitch distribution, structure, and function in bacteria

(2019) Nikolet Pavlova et al.   GENE

Mechanism for coordinate regulation of rpoS by sRNA-sRNA interaction in Escherichia coli

(2019) Wonkyong Kim et al.   RNA Biology

Antibiotics targeting bacterial ribosomal subunit biogenesis

(2019) W Scott Champney   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

New aspects of RNA-based regulation by Hfq and its partner sRNAs

(2018) Kumari Kavita et al.   CURRENT OPINION IN MICROBIOLOGY

Small RNA-mediated regulation in bacteria: A growing palette of diverse mechanisms

(2018) Tanmay Dutta et al.   GENE

Unstructured 5′-tails act through ribosome standby to override inhibitory structure at ribosome binding sites

(2018) Maaike Sterk et al.   NUCLEIC ACIDS RESEARCH

Translation initiation in bacterial polysomes through ribosome loading on a standby site on a highly translated mRNA

(2018) Irena Andreeva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

GcvB small RNA uses two distinct seed regions to regulate an extensive targetome

(2018) David Lalaouna et al.   MOLECULAR MICROBIOLOGY

Stem-Loop Structures within mRNA Coding Sequences Activate Translation Initiation and Mediate Control by Small Regulatory RNAs

(2017) Jonathan Jagodnik et al.   MOLECULAR CELL

High-fidelity mass analysis unveils heterogeneity in intact ribosomal particles

(2017) Michiel van de Waterbeemd et al.   NATURE METHODS

Translational regulation by bacterial small RNAs via an unusual Hfq-dependent mechanism

(2017) Muhammad S Azam et al.   NUCLEIC ACIDS RESEARCH

MCR-1 Inhibition with Peptide-Conjugated Phosphorodiamidate Morpholino Oligomers Restores Sensitivity to Polymyxin in Escherichia coli

(2017) Seth M. Daly et al.   mBio

Peptide-conjugated phosphorodiamidate morpholino oligomer (PPMO) restores carbapenem susceptibility to NDM-1-positive pathogensin vitroandin vivo

(2016) Erin K. Sully et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Grad-seq guides the discovery of ProQ as a major small RNA-binding protein

(2016) Alexandre Smirnov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Antibiotic-Induced Changes in the Intestinal Microbiota and Disease

(2016) Simone Becattini et al.   TRENDS IN MOLECULAR MEDICINE

Initiation of mRNA translation in bacteria: structural and dynamic aspects

(2015) Claudio O. Gualerzi et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNA

(2015) M. Miyakoshi et al.   EMBO JOURNAL

A 3′ External Transcribed Spacer in a tRNA Transcript Acts as a Sponge for Small RNAs to Prevent Transcriptional Noise

(2015) David Lalaouna et al.   MOLECULAR CELL

DsrA regulatory RNA represses bothhnsandrbsDmRNAs through distinct mechanisms inEscherichia coli

(2015) David Lalaouna et al.   MOLECULAR MICROBIOLOGY

An mRNA-Derived Noncoding RNA Targets and Regulates the Ribosome

(2014) Andreas Pircher et al.   MOLECULAR CELL

Short-Term Effect of Antibiotics on Human Gut Microbiota

(2014) Suchita Panda et al.   PLoS One

A frameshifting stimulatory stem loop destabilizes the hybrid state and impedes ribosomal translocation

(2014) H.-K. Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Translation Enhancing ACA Motifs and Their Silencing by a Bacterial Small Regulatory RNA

(2014) Qi Yang et al.   PLoS Genetics

A peptide-morpholino oligomer conjugate targeting Staphylococcus aureus gyrA mRNA improves healing in an infected mouse cutaneous wound model

(2013) Andrew J. Sawyer et al.   INTERNATIONAL JOURNAL OF PHARMACEUTICS

Comparison of mRNA features affecting translation initiation and reinitiation

(2012) Ilya A. Osterman et al.   NUCLEIC ACIDS RESEARCH

tRNA-Derived Fragments Target the Ribosome and Function as Regulatory Non-Coding RNA inHaloferax volcanii

(2012) Jennifer Gebetsberger et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpD

(2011) Kathrin S. Fröhlich et al.   NUCLEIC ACIDS RESEARCH

The small RNA SgrS controls sugar–phosphate accumulation by regulating multiple PTS genes

(2011) Jennifer B. Rice et al.   NUCLEIC ACIDS RESEARCH

Genomewide characterization of non-polyadenylated RNAs

(2011) Li Yang et al.   GENOME BIOLOGY

Degradation of ribosomal RNA during starvation: Comparison to quality control during steady-state growth and a role for RNase PH

(2010) G. N. Basturea et al.   RNA

Bacterial Small RNA Regulators: Versatile Roles and Rapidly Evolving Variations

(2010) S. Gottesman et al.   Cold Spring Harbor Perspectives in Biology

SnapShot: Antibiotic Inhibition of Protein Synthesis I

(2009) Daniel Sohmen et al.   CELL

Caught at its own game: regulatory small RNA inactivated by an inducible transcript mimicking its target

(2009) N. Figueroa-Bossi et al.   GENES & DEVELOPMENT

A pH-responsive riboregulator

(2009) Gal Nechooshtan et al.   GENES & DEVELOPMENT

Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation

(2009) Verena Pfeiffer et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

An analysis of initiation codon utilization in the Domain Bacteria - concerns about the quality of bacterial genome annotation

(2008) A. Villegas et al.   MICROBIOLOGY-SGM

Small RNA Binding to 5′ mRNA Coding Region Inhibits Translational Initiation

(2008) Marie Bouvier et al.   MOLECULAR CELL