Mechanism for coordinate regulation of rpoS by sRNA-sRNA interaction in Escherichia coli

Contrasting silencing mechanisms of the same target mRNA by two regulatory RNAs in Escherichia coli

(2017) David Lalaouna et al.   NUCLEIC ACIDS RESEARCH

sRNA-Mediated Control of Transcription Termination in E. coli

(2016) Nadezda Sedlyarova et al.   CELL

Global Mapping of Small RNA-Target Interactions in Bacteria

(2016) Sahar Melamed et al.   MOLECULAR CELL

C-terminal domain of the RNA chaperone Hfq drives sRNA competition and release of target RNA

(2016) Andrew Santiago-Frangos et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Circular RNA Expression: Its Potential Regulation and Function

(2016) Julia Salzman   TRENDS IN GENETICS

Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNA

(2015) M. Miyakoshi et al.   EMBO JOURNAL

Identification of novel sRNAs involved in biofilm formation, motility and fimbriae formation in Escherichia coli

(2015) Geunu Bak et al.   Scientific Reports

The Cpx Envelope Stress Response Regulates and Is Regulated by Small Noncoding RNAs

(2014) S. L. Vogt et al.   JOURNAL OF BACTERIOLOGY

CopraRNA and IntaRNA: predicting small RNA targets, networks and interaction domains

(2014) Patrick R. Wright et al.   NUCLEIC ACIDS RESEARCH

The double-stranded transcriptome of Escherichia coli

(2014) M. Lybecker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNase III: Genetics and Function; Structure and Mechanism

(2013) Donald L. Court et al.   Annual Review of Genetics

Positional Effects of AAN Motifs in rpoS Regulation by sRNAs and Hfq

(2013) Yi Peng et al.   JOURNAL OF MOLECULAR BIOLOGY

Exploring sRNA-mediated gene silencing mechanisms using artificial small RNAs derived from a natural RNA scaffold in Escherichia coli

(2013) Hongmarn Park et al.   NUCLEIC ACIDS RESEARCH

Comparative genomics boosts target prediction for bacterial small RNAs

(2013) P. R. Wright et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ribonuclease III mechanisms of double-stranded RNA cleavage

(2013) Allen W. Nicholson   Wiley Interdisciplinary Reviews-RNA

Roles ofrpoS-activating small RNAs in pathways leading to acid resistance ofEscherichia coli

(2013) Geunu Bak et al.   MicrobiologyOpen

Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coli

(2012) Franziska Mika et al.   MOLECULAR MICROBIOLOGY

RNase E: at the interface of bacterial RNA processing and decay

(2012) George A. Mackie   NATURE REVIEWS MICROBIOLOGY

Signal integration by the Cpx-envelope stress system

(2011) Sabine Hunke et al.   FEMS MICROBIOLOGY LETTERS

Competition among Hfq-binding small RNAs in Escherichia coli

(2011) Kyung Moon et al.   MOLECULAR MICROBIOLOGY

Rapid and Highly Efficient Method for Scarless Mutagenesis within the Salmonella enterica Chromosome

(2011) Kathrin Blank et al.   PLoS One

The RpoS-Mediated General Stress Response inEscherichia coli

(2010) Aurelia Battesti et al.   Annual Review of Microbiology

Integrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNA

(2010) Pierre Mandin et al.   EMBO JOURNAL

Mechanism of Positive Regulation by DsrA and RprA Small Noncoding RNAs: Pairing Increases Translation and Protects rpoS mRNA from Degradation

(2010) C. A. McCullen et al.   JOURNAL OF BACTERIOLOGY

Recognition and discrimination of target mRNAs by Sib RNAs, a cis-encoded sRNA family

(2010) Kook Han et al.   NUCLEIC ACIDS RESEARCH

Positive regulation by small RNAs and the role of Hfq

(2010) T. Soper et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Elevated levels of  S inhibit biofilm formation in Escherichia coli: a role for the Rcs phosphorelay

(2009) L. Ferrieres et al.   MICROBIOLOGY-SGM

Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA

(2009) Kai Papenfort et al.   MOLECULAR MICROBIOLOGY

The Crp-Activated Small Noncoding Regulatory RNA CyaR (RyeE) Links Nutritional Status to Group Behavior

(2008) N. De Lay et al.   JOURNAL OF BACTERIOLOGY

Down-regulation of Outer Membrane Proteins by Noncoding RNAs: Unraveling the cAMP–CRP- and σE-Dependent CyaR–ompX Regulatory Case

(2008) Jesper Johansen et al.   JOURNAL OF MOLECULAR BIOLOGY

Control of RpoS in global gene expression of Escherichia coli in minimal media

(2008) Tao Dong et al.   MOLECULAR GENETICS AND GENOMICS

Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis

(2008) Kai Papenfort et al.   MOLECULAR MICROBIOLOGY

The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA

(2008) T. J. Soper et al.   RNA