Evolution and lineage dynamics of a transmissible cancer in Tasmanian devils
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Title
Evolution and lineage dynamics of a transmissible cancer in Tasmanian devils
Authors
Keywords
Cancers and neoplasms, Malignant tumors, Cancer genomics, Biopsy, Phylogenetic analysis, Genomics, Tetraploidy, Copy number variation
Journal
PLOS BIOLOGY
Volume 18, Issue 11, Pages e3000926
Publisher
Public Library of Science (PLoS)
Online
2020-11-25
DOI
10.1371/journal.pbio.3000926
References
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Note: Only part of the references are listed.- IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era
- (2020) Bui Quang Minh et al. MOLECULAR BIOLOGY AND EVOLUTION
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- (2019) Lindsay Kosack et al. CANCER CELL
- Individual and temporal variation in pathogen load predicts long-term impacts of an emerging infectious disease
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- Somatic evolution and global expansion of an ancient transmissible cancer lineage
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- The Origins and Vulnerabilities of Two Transmissible Cancers in Tasmanian Devils
- (2018) Maximilian R. Stammnitz et al. CANCER CELL
- Tracking Cancer Evolution Reveals Constrained Routes to Metastases: TRACERx Renal
- (2018) Samra Turajlic et al. CELL
- Chromosome Segregation Is Biased by Kinetochore Size
- (2018) Danica Drpic et al. CURRENT BIOLOGY
- Density trends and demographic signals uncover the long-term impact of transmissible cancer in Tasmanian devils
- (2018) Billie T. Lazenby et al. JOURNAL OF APPLIED ECOLOGY
- Chromosomal instability drives metastasis through a cytosolic DNA response
- (2018) Samuel F. Bakhoum et al. NATURE
- Non-random Mis-segregation of Human Chromosomes
- (2018) Joseph Thomas Worrall et al. Cell Reports
- The dark side of centromeres: types, causes and consequences of structural abnormalities implicating centromeric DNA
- (2018) V. Barra et al. Nature Communications
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- (2017) Diep Thi Hoang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Patient-derived xenografts undergo mouse-specific tumor evolution
- (2017) Uri Ben-David et al. NATURE GENETICS
- ModelFinder: fast model selection for accurate phylogenetic estimates
- (2017) Subha Kalyaanamoorthy et al. NATURE METHODS
- Tracking the Evolution of Non–Small-Cell Lung Cancer
- (2017) Mariam Jamal-Hanjani et al. NEW ENGLAND JOURNAL OF MEDICINE
- Pathogenetic significance and possibility as a therapeutic target of platelet derived growth factor
- (2017) Yoko Ishii et al. PATHOLOGY INTERNATIONAL
- DNA copy number changes define spatial patterns of heterogeneity in colorectal cancer
- (2017) Soulafa Mamlouk et al. Nature Communications
- Copy number profiles of paired primary and metastatic colorectal cancers
- (2017) Futoshi Kawamata et al. Oncotarget
- Regression of devil facial tumour disease following immunotherapy in immunised Tasmanian devils
- (2017) Cesar Tovar et al. Scientific Reports
- Identification of candidate genes for devil facial tumour disease tumourigenesis
- (2017) Robyn L. Taylor et al. Scientific Reports
- Metastasis as an evolutionary process
- (2016) S. Turajlic et al. SCIENCE
- Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices
- (2016) Olga Chernomor et al. SYSTEMATIC BIOLOGY
- Within-host competitive interactions as a mechanism for the maintenance of parasite diversity
- (2015) Farrah Bashey PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- A second transmissible cancer in Tasmanian devils
- (2015) Ruth J. Pye et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Human Structural Variation: Mechanisms of Chromosome Rearrangements
- (2015) Brooke Weckselblatt et al. TRENDS IN GENETICS
- MIPgen: optimized modeling and design of molecular inversion probes for targeted resequencing
- (2014) Evan A. Boyle et al. BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Extensive population decline in the Tasmanian devil predates European settlement and devil facial tumour disease
- (2014) A. Bruniche-Olsen et al. Biology Letters
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications
- (2014) Andy Rimmer et al. NATURE GENETICS
- Estimating telomere length from whole genome sequence data
- (2014) Zhihao Ding et al. NUCLEIC ACIDS RESEARCH
- Copynumber: Efficient algorithms for single- and multi-track copy number segmentation
- (2013) Gro Nilsen et al. BMC GENOMICS
- Parallel evolution of tumour subclones mimics diversity between tumours
- (2013) Pierre Martinez et al. JOURNAL OF PATHOLOGY
- Reversible epigenetic down-regulation of MHC molecules by devil facial tumour disease illustrates immune escape by a contagious cancer
- (2013) H. V. Siddle et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
- (2012) H. Thorvaldsdottir et al. BRIEFINGS IN BIOINFORMATICS
- Genome Sequencing and Analysis of the Tasmanian Devil and Its Transmissible Cancer
- (2012) Elizabeth P. Murchison et al. CELL
- Simulating devil facial tumour disease outbreaks across empirically derived contact networks
- (2012) Rodrigo Hamede et al. JOURNAL OF APPLIED ECOLOGY
- Telomere Dynamics and Homeostasis in a Transmissible Cancer
- (2012) Beata Ujvari et al. PLoS One
- Extreme Telomere Length Dimorphism in the Tasmanian Devil and Related Marsupials Suggests Parental Control of Telomere Length
- (2012) Hannah S. Bender et al. PLoS One
- Evolution in a transmissible cancer: a study of the chromosomal changes in devil facial tumor (DFT) as it spreads through the wild Tasmanian devil population
- (2012) Anne-Maree Pearse et al. Cancer Genetics
- Genomic Restructuring in the Tasmanian Devil Facial Tumour: Chromosome Painting and Gene Mapping Provide Clues to Evolution of a Transmissible Tumour
- (2012) Janine E. Deakin et al. PLoS Genetics
- Evaluation of Selective Culling of Infected Individuals to Control Tasmanian Devil Facial Tumor Disease
- (2010) SHELLY LACHISH et al. CONSERVATION BIOLOGY
- Allele-specific copy number analysis of tumors
- (2010) P. Van Loo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Transmission dynamics of Tasmanian devil facial tumor disease may lead to disease-induced extinction
- (2009) Hamish McCallum et al. ECOLOGY
- Virulence evolution and the trade-off hypothesis: history, current state of affairs and the future
- (2008) S. ALIZON et al. JOURNAL OF EVOLUTIONARY BIOLOGY
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