Transcriptional Programs of Circuit Assembly in the Drosophila Visual System

A genetic, genomic, and computational resource for exploring neural circuit function

(2020) Fred P Davis et al.   eLife

A single-cell transcriptomic atlas of the adult Drosophila ventral nerve cord

(2020) Aaron M Allen et al.   eLife

Synaptic Specificity, Recognition Molecules, and Assembly of Neural Circuits

(2020) Joshua R. Sanes et al.   CELL

Deterministic splicing of Dscam2 is regulated by Muscleblind

(2019) Joshua Shing Shun Li et al.   Science Advances

Cell-type-Specific Patterned Stimulus-Independent Neuronal Activity in the Drosophila Visual System during Synapse Formation

(2019) Orkun Akin et al.   NEURON

Axo-axonic Innervation of Neocortical Pyramidal Neurons by GABAergic Chandelier Cells Requires AnkyrinG-Associated L1CAM

(2019) Yilin Tai et al.   NEURON

Comprehensive Integration of Single-Cell Data

(2019) Tim Stuart et al.   CELL

Neuronal identity control by terminal selectors in worms, flies, and chordates

(2019) Oliver Hobert et al.   CURRENT OPINION IN NEUROBIOLOGY

Control of Synaptic Specificity by Establishing a Relative Preference for Synaptic Partners

(2019) Chundi Xu et al.   NEURON

Coordination between stochastic and deterministic specification in the Drosophila visual system

(2019) Maximilien Courgeon et al.   SCIENCE

Interactions between Dpr11 and DIP-γ control selection of amacrine neurons in Drosophila color vision circuits

(2019) Kaushiki P Menon et al.   eLife

Modular transcriptional programs separately define axon and dendrite connectivity

(2019) Yerbol Z Kurmangaliyev et al.   eLife

Phenotypic Convergence: Distinct Transcription Factors Regulate Common Terminal Features

(2018) Nikolaos Konstantinides et al.   CELL

A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain

(2018) Kristofer Davie et al.   CELL

FlyXCDB—A Resource for Drosophila Cell Surface and Secreted Proteins and Their Extracellular Domains

(2018) Jimin Pei et al.   JOURNAL OF MOLECULAR BIOLOGY

Integrating single-cell transcriptomic data across different conditions, technologies, and species

(2018) Andrew Butler et al.   NATURE BIOTECHNOLOGY

Tbr1 instructs laminar patterning of retinal ganglion cell dendrites

(2018) Jinyue Liu et al.   NATURE NEUROSCIENCE

Differing Strategies Despite Shared Lineages of Motor Neurons and Glia to Achieve Robust Development of an Adult Neuropil in Drosophila

(2018) Jonathan Enriquez et al.   NEURON

Role for Wnt Signaling in Retinal Neuropil Development: Analysis via RNA-Seq and In Vivo Somatic CRISPR Mutagenesis

(2018) Sumeet Sarin et al.   NEURON

Cellular diversity in the Drosophila midbrain revealed by single-cell transcriptomics

(2018) Vincent Croset et al.   eLife

Neuron-Subtype-Specific Expression, Interaction Affinities, and Specificity Determinants of DIP/Dpr Cell Recognition Proteins

(2018) Filip Cosmanescu et al.   NEURON

FlyBase 2.0: the next generation

(2018) Jim Thurmond et al.   NUCLEIC ACIDS RESEARCH

Neuronal specification in space and time

(2018) Isabel Holguera et al.   SCIENCE

Multiplexed droplet single-cell RNA-sequencing using natural genetic variation

(2017) Hyun Min Kang et al.   NATURE BIOTECHNOLOGY

Massively parallel digital transcriptional profiling of single cells

(2017) Grace X. Y. Zheng et al.   Nature Communications

Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development

(2017) Hanqing Li et al.   eLife

Presynaptic LRP4 promotes synapse number and function of excitatory CNS neurons

(2017) Timothy J Mosca et al.   eLife

Buffering of Genetic Regulatory Networks in Drosophila melanogaster

(2016) J. M. Fear et al.   GENETICS

The Matrix Proteins Hasp and Hig Exhibit Segregated Distribution within Synaptic Clefts and Play Distinct Roles in Synaptogenesis

(2016) M. Nakayama et al.   JOURNAL OF NEUROSCIENCE

Alternative polyadenylation of mRNA precursors

(2016) Bin Tian et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Dscam Proteins Direct Dendritic Targeting through Adhesion

(2016) Wael Tadros et al.   NEURON

Genome-wide identification of neuronal activity-regulated genes in Drosophila

(2016) Xiao Chen et al.   eLife

Ig Superfamily Ligand and Receptor Pairs Expressed in Synaptic Partners in Drosophila

(2015) Liming Tan et al.   CELL

Transmission, Development, and Plasticity of Synapses

(2015) Kathryn P. Harris et al.   GENETICS

Synaptic circuits and their variations within different columns in the visual system ofDrosophila

(2015) Shin-ya Takemura et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transmission, Development, and Plasticity of Synapses

(2015) Kathryn P. Harris et al.   GENETICS

Differential Adhesion Determines the Organization of Synaptic Fascicles in the Drosophila Visual System

(2014) Tina Schwabe et al.   CURRENT BIOLOGY

Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines

(2014) W. Huang et al.   GENOME RESEARCH

The irre Cell Recognition Module (IRM) Protein Kirre Is Required to Form the Reciprocal Synaptic Network of L4 Neurons in theDrosophilaLamina

(2014) Kevin Lüthy et al.   JOURNAL OF NEUROGENETICS

Drep-2 is a novel synaptic protein important for learning and memory

(2014) Till F M Andlauer et al.   eLife

CrossMap: a versatile tool for coordinate conversion between genome assemblies

(2013) Hao Zhao et al.   BIOINFORMATICS

An Extracellular Interactome of Immunoglobulin and LRR Proteins Reveals Receptor-Ligand Networks

(2013) Engin Özkan et al.   CELL

Brain-specific-homeobox is required for the specification of neuronal types in the Drosophila optic lobe

(2013) Eri Hasegawa et al.   DEVELOPMENTAL BIOLOGY

The adhesion protein IgSF9b is coupled to neuroligin 2 via S-SCAM to promote inhibitory synapse development

(2013) Jooyeon Woo et al.   JOURNAL OF CELL BIOLOGY

A visual motion detection circuit suggested by Drosophila connectomics

(2013) Shin-ya Takemura et al.   NATURE

ELAV mediates 3' UTR extension in the Drosophila nervous system

(2012) V. Hilgers et al.   GENES & DEVELOPMENT

The Drosophila melanogaster Genetic Reference Panel

(2012) Trudy F. C. Mackay et al.   NATURE

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

Wiring Economy and Volume Exclusion Determine Neuronal Placement in the Drosophila Brain

(2011) Marta Rivera-Alba et al.   CURRENT BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Drosophila motor axons recognize and follow a Sidestep-labeled substrate pathway to reach their target fields

(2009) M. Siebert et al.   GENES & DEVELOPMENT

Genomic Analysis of Drosophila Neuronal Remodeling: A Role for the RNA-Binding Protein Boule as a Negative Regulator of Axon Pruning

(2008) E. D. Hoopfer et al.   JOURNAL OF NEUROSCIENCE

Coordinate control of synaptic-layer specificity and rhodopsins in photoreceptor neurons

(2008) Marta Morey et al.   NATURE