Tbr1 instructs laminar patterning of retinal ganglion cell dendrites

The sorting receptor SorCS3 is a stronger regulator of glutamate receptor functions compared to GABAergic mechanisms in the hippocampus

(2017) Gitte B. Christiansen et al.   HIPPOCAMPUS

Cellular and Molecular Analysis of Dendritic Morphogenesis in a Retinal Cell Type That Senses Color Contrast and Ventral Motion

(2017) Jinyue Liu et al.   JOURNAL OF NEUROSCIENCE

Satb1 Regulates Contactin 5 to Pattern Dendrites of a Mammalian Retinal Ganglion Cell

(2017) Yi-Rong Peng et al.   NEURON

Four alpha ganglion cell types in mouse retina: Function, structure, and molecular signatures

(2017) Brenna Krieger et al.   PLoS One

TBR1 regulates autism risk genes in the developing neocortex

(2016) James H. Notwell et al.   GENOME RESEARCH

The functional diversity of retinal ganglion cells in the mouse

(2016) Tom Baden et al.   NATURE

Two Pairs of ON and OFF Retinal Ganglion Cells Are Defined by Intersectional Patterns of Transcription Factor Expression

(2016) David L. Rousso et al.   Cell Reports

The Types of Retinal Ganglion Cells: Current Status and Implications for Neuronal Classification

(2015) Joshua R. Sanes et al.   Annual Review of Neuroscience

Stage-specific reference genes significant for quantitative PCR during mouse retinal development

(2015) Hiroko Adachi et al.   GENES TO CELLS

Sidekick 2 directs formation of a retinal circuit that detects differential motion

(2015) Arjun Krishnaswamy et al.   NATURE

Subtype-Specific Regeneration of Retinal Ganglion Cells following Axotomy: Effects of Osteopontin and mTOR Signaling

(2015) Xin Duan et al.   NEURON

Transgenic Mice for Intersectional Targeting of Neural Sensors and Effectors with High Specificity and Performance

(2015) Linda Madisen et al.   NEURON

Brain-specific transcriptional regulator T-brain-1 controls brain wiring and neuronal activity in autism spectrum disorders

(2015) Tzyy-Nan Huang et al.   Frontiers in Neuroscience

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Type II Cadherins Guide Assembly of a Direction-Selective Retinal Circuit

(2014) Xin Duan et al.   CELL

Visual Space Is Represented by Nonmatching Topographies of Distinct Mouse Retinal Ganglion Cell Types

(2014) Adam Bleckert et al.   CURRENT BIOLOGY

Spatiotemporal expression analysis of the growth factor receptor SorCS3

(2014) Sandra Oetjen et al.   JOURNAL OF COMPARATIVE NEUROLOGY

T-box Transcription Regulator Tbr2 Is Essential for the Formation and Maintenance of Opn4/Melanopsin-Expressing Intrinsically Photosensitive Retinal Ganglion Cells

(2014) C.-A. Mao et al.   JOURNAL OF NEUROSCIENCE

Tbr2 Is Required to Generate a Neural Circuit Mediating the Pupillary Light Reflex

(2014) N. T. Sweeney et al.   JOURNAL OF NEUROSCIENCE

Synaptic, transcriptional and chromatin genes disrupted in autism

(2014) Silvia De Rubeis et al.   NATURE

Tbr1 haploinsufficiency impairs amygdalar axonal projections and results in cognitive abnormality

(2014) Tzyy-Nan Huang et al.   NATURE NEUROSCIENCE

Full-length RNA-seq from single cells using Smart-seq2

(2014) Simone Picelli et al.   Nature Protocols

Synaptic Laminae in the Visual System: Molecular Mechanisms Forming Layers of Perception

(2013) Herwig Baier   Annual Review of Cell and Developmental Biology

Improved tools for the Brainbow toolbox

(2013) Dawen Cai et al.   NATURE METHODS

Sortilin-Related Receptor SORCS3 Is a Postsynaptic Modulator of Synaptic Depression and Fear Extinction

(2013) Tilman Breiderhoff et al.   PLoS One

On and Off Retinal Circuit Assembly by Divergent Molecular Mechanisms

(2013) L. O. Sun et al.   SCIENCE

Afadin, A Ras/Rap Effector That Controls Cadherin Function, Promotes Spine and Excitatory Synapse Density in the Hippocampus

(2012) G. M. J. Beaudoin et al.   JOURNAL OF NEUROSCIENCE

Expanding the Ig Superfamily Code for Laminar Specificity in Retina: Expression and Role of Contactins

(2012) M. Yamagata et al.   JOURNAL OF NEUROSCIENCE

MEGF10 and MEGF11 mediate homotypic interactions required for mosaic spacing of retinal neurons

(2012) Jeremy N. Kay et al.   NATURE

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Cell fate determination in the vertebrate retina

(2012) Erin A. Bassett et al.   TRENDS IN NEUROSCIENCES

Stereotyped axonal arbors of retinal ganglion cell subsets in the mouse superior colliculus

(2011) Y. Kate Hong et al.   JOURNAL OF COMPARATIVE NEUROLOGY

Retinal Ganglion Cells with Distinct Directional Preferences Differ in Molecular Identity, Structure, and Central Projections

(2011) J. N. Kay et al.   JOURNAL OF NEUROSCIENCE

Tbr1 and Fezf2 Regulate Alternate Corticofugal Neuronal Identities during Neocortical Development

(2011) W. L. McKenna et al.   JOURNAL OF NEUROSCIENCE

Transmembrane semaphorin signalling controls laminar stratification in the mammalian retina

(2011) Ryota L. Matsuoka et al.   NATURE

Parallel Mechanisms Encode Direction in the Retina

(2011) Stuart Trenholm et al.   NEURON

Leptin Action on GABAergic Neurons Prevents Obesity and Reduces Inhibitory Tone to POMC Neurons

(2011) Linh Vong et al.   NEURON

TBR1 directly represses Fezf2 to control the laminar origin and development of the corticospinal tract

(2011) W. Han et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Laminar Restriction of Retinal Ganglion Cell Dendrites and Axons: Subtype-Specific Developmental Patterns Revealed with Transgenic Markers

(2010) I.-J. Kim et al.   JOURNAL OF NEUROSCIENCE

GREAT improves functional interpretation of cis-regulatory regions

(2010) Cory Y McLean et al.   NATURE BIOTECHNOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

ALCAM Regulates Mediolateral Retinotopic Mapping in the Superior Colliculus

(2009) M. Buhusi et al.   JOURNAL OF NEUROSCIENCE

Genetic Identification of an On-Off Direction- Selective Retinal Ganglion Cell Subtype Reveals a Layer-Specific Subcortical Map of Posterior Motion

(2009) Andrew D. Huberman et al.   NEURON

The Immunoglobulin-Like Cell Adhesion Molecule Nectin and Its Associated Protein Afadin

(2008) Yoshimi Takai et al.   Annual Review of Cell and Developmental Biology

Dscam and Sidekick proteins direct lamina-specific synaptic connections in vertebrate retina

(2008) Masahito Yamagata et al.   NATURE

Molecular identification of a retinal cell type that responds to upward motion

(2008) In-Jung Kim et al.   NATURE

VPS10P-domain receptors — regulators of neuronal viability and function

(2008) Thomas E. Willnow et al.   NATURE REVIEWS NEUROSCIENCE

Eyecup scope—optical recordings of light stimulus-evoked fluorescence signals in the retina

(2008) Thomas Euler et al.   PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY