- Home
- Publications
- Publication Search
- Publication Details
Title
A single cell atlas of the human liver tumor microenvironment
Authors
Keywords
-
Journal
Molecular Systems Biology
Volume 16, Issue 12, Pages -
Publisher
EMBO
Online
2020-12-18
DOI
10.15252/msb.20209682
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Benchmarking single-cell RNA-sequencing protocols for cell atlas projects
- (2020) Elisabetta Mereu et al. NATURE BIOTECHNOLOGY
- Single-cell transcriptomic architecture and intercellular crosstalk of human intrahepatic cholangiocarcinoma
- (2020) Min Zhang et al. JOURNAL OF HEPATOLOGY
- Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma
- (2020) Ankur Sharma et al. CELL
- Osteopontin Expression Identifies a Subset of Recruited Macrophages Distinct from Kupffer Cells in the Fatty Liver
- (2020) Anneleen Remmerie et al. IMMUNITY
- TREM2 acts as a tumor suppressor in hepatocellular carcinoma by targeting the PI3K/Akt/β-catenin pathway
- (2019) Wenqing Tang et al. Oncogenesis
- Intra-Tumoral Metabolic Zonation and Resultant Phenotypic Diversification Are Dictated by Blood Vessel Proximity
- (2019) Saran Kumar et al. Cell Metabolism
- Spatial heterogeneity in the mammalian liver
- (2019) Shani Ben-Moshe et al. Nature Reviews Gastroenterology & Hepatology
- Comprehensive Integration of Single-Cell Data
- (2019) Tim Stuart et al. CELL
- A human liver cell atlas reveals heterogeneity and epithelial progenitors
- (2019) Nadim Aizarani et al. NATURE
- Single cell analysis of human foetal liver captures the transcriptional profile of hepatobiliary hybrid progenitors
- (2019) Joe M. Segal et al. Nature Communications
- Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma
- (2019) Qiming Zhang et al. CELL
- Resolving the fibrotic niche of human liver cirrhosis at single-cell level
- (2019) P. Ramachandran et al. NATURE
- Decoding human fetal liver haematopoiesis
- (2019) Dorin-Mirel Popescu et al. NATURE
- NicheNet: modeling intercellular communication by linking ligands to target genes
- (2019) Robin Browaeys et al. NATURE METHODS
- Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment
- (2018) Elham Azizi et al. CELL
- Understanding the tumor immune microenvironment (TIME) for effective therapy
- (2018) Mikhail Binnewies et al. NATURE MEDICINE
- Phenotype molding of stromal cells in the lung tumor microenvironment
- (2018) Diether Lambrechts et al. NATURE MEDICINE
- Sensitive and powerful single-cell RNA sequencing using mcSCRB-seq
- (2018) Johannes W. Bagnoli et al. Nature Communications
- zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs
- (2018) Swati Parekh et al. GigaScience
- A Structured Tumor-Immune Microenvironment in Triple Negative Breast Cancer Revealed by Multiplexed Ion Beam Imaging
- (2018) Leeat Keren et al. CELL
- Spatial Reconstruction of Single Enterocytes Uncovers Broad Zonation along the Intestinal Villus Axis
- (2018) Andreas E. Moor et al. CELL
- Paired-cell sequencing enables spatial gene expression mapping of liver endothelial cells
- (2018) Keren Bahar Halpern et al. NATURE BIOTECHNOLOGY
- Oncofoetal insulin receptor isoform A marks the tumour endothelium; an underestimated pathway during tumour angiogenesis and angiostatic treatment
- (2018) Patrycja Nowak-Sliwinska et al. BRITISH JOURNAL OF CANCER
- PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools
- (2018) Huaiyu Mi et al. NUCLEIC ACIDS RESEARCH
- Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations
- (2018) Sonya A. MacParland et al. Nature Communications
- Phagocyte-extracellular matrix crosstalk empowers tumor development and dissemination
- (2017) Chen Varol et al. FEBS Journal
- Multilineage communication regulates human liver bud development from pluripotency
- (2017) J. Gray Camp et al. NATURE
- Single-cell spatial reconstruction reveals global division of labour in the mammalian liver
- (2017) Keren Bahar Halpern et al. NATURE
- Dll4 and Notch signalling couples sprouting angiogenesis and artery formation
- (2017) Mara E. Pitulescu et al. NATURE CELL BIOLOGY
- Global mRNA polarization regulates translation efficiency in the intestinal epithelium
- (2017) Andreas E. Moor et al. SCIENCE
- Specification and Diversification of Pericytes and Smooth Muscle Cells from Mesenchymoangioblasts
- (2017) Akhilesh Kumar et al. Cell Reports
- The Human Cell Atlas
- (2017) Aviv Regev et al. eLife
- Tertiary Lymphoid Structures in Cancer: Drivers of Antitumor Immunity, Immunosuppression, or Bystander Sentinels in Disease?
- (2017) Emily Jayne Colbeck et al. Frontiers in Immunology
- The extracellular matrix: Tools and insights for the “omics” era
- (2016) Alexandra Naba et al. MATRIX BIOLOGY
- Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
- (2016) Maxim V. Kuleshov et al. NUCLEIC ACIDS RESEARCH
- Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq
- (2016) I. Tirosh et al. SCIENCE
- Hepatocellular carcinoma
- (2016) Josep M. Llovet et al. Nature Reviews Disease Primers
- Bursty Gene Expression in the Intact Mammalian Liver
- (2015) Keren Bahar Halpern et al. MOLECULAR CELL
- Spatial reconstruction of single-cell gene expression data
- (2015) Rahul Satija et al. NATURE BIOTECHNOLOGY
- Toward understanding and exploiting tumor heterogeneity
- (2015) Ash A Alizadeh et al. NATURE MEDICINE
- A draft network of ligand–receptor-mediated multicellular signalling in human
- (2015) Jordan A. Ramilowski et al. Nature Communications
- Multiplexed ion beam imaging of human breast tumors
- (2014) Michael Angelo et al. NATURE MEDICINE
- Highly multiplexed imaging of tumor tissues with subcellular resolution by mass cytometry
- (2014) Charlotte Giesen et al. NATURE METHODS
- Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma
- (2014) A. P. Patel et al. SCIENCE
- Massively Parallel Single-Cell RNA-Seq for Marker-Free Decomposition of Tissues into Cell Types
- (2014) D. A. Jaitin et al. SCIENCE
- Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool
- (2013) Edward Y Chen et al. BMC BIOINFORMATICS
- Integrative Molecular Analysis of Intrahepatic Cholangiocarcinoma Reveals 2 Classes That Have Different Outcomes
- (2013) Daniela Sia et al. GASTROENTEROLOGY
- Tumour heterogeneity in the clinic
- (2013) Philippe L. Bedard et al. NATURE
- Tumour heterogeneity and cancer cell plasticity
- (2013) Corbin E. Meacham et al. NATURE
- Tissue-Specific Cadherin CDH17 Is a Useful Marker of Gastrointestinal Adenocarcinomas With Higher Sensitivity Than CDX2
- (2012) Nicole C. Panarelli et al. AMERICAN JOURNAL OF CLINICAL PATHOLOGY
- Sox17 promotes tumor angiogenesis and destabilizes tumor vessels in mice
- (2012) Hanseul Yang et al. JOURNAL OF CLINICAL INVESTIGATION
- Integrated analysis of somatic mutations and focal copy-number changes identifies key genes and pathways in hepatocellular carcinoma
- (2012) Cécile Guichard et al. NATURE GENETICS
- Hallmarks of Cancer: The Next Generation
- (2011) Douglas Hanahan et al. CELL
- Pericytes: Developmental, Physiological, and Pathological Perspectives, Problems, and Promises
- (2011) Annika Armulik et al. DEVELOPMENTAL CELL
- Single-molecule transcript counting of stem-cell markers in the mouse intestine
- (2011) Shalev Itzkovitz et al. NATURE CELL BIOLOGY
- Cholangiocarcinoma—controversies and challenges
- (2011) Tushar Patel Nature Reviews Gastroenterology & Hepatology
- Pericytes and vessel maturation during tumor angiogenesis and metastasis
- (2010) Ahmad Raza et al. AMERICAN JOURNAL OF HEMATOLOGY
- HepatoNet1: a comprehensive metabolic reconstruction of the human hepatocyte for the analysis of liver physiology
- (2010) Christoph Gille et al. Molecular Systems Biology
- Decorin is a novel antagonistic ligand of the Met receptor
- (2009) Silvia Goldoni et al. JOURNAL OF CELL BIOLOGY
- Wnt/Planar cell polarity signaling: A new paradigm for cancer therapy
- (2009) Y. Wang MOLECULAR CANCER THERAPEUTICS
- Cthrc1 Selectively Activates the Planar Cell Polarity Pathway of Wnt Signaling by Stabilizing the Wnt-Receptor Complex
- (2008) Shinji Yamamoto et al. DEVELOPMENTAL CELL
- Co-evolution of tumor cells and their microenvironment
- (2008) Kornelia Polyak et al. TRENDS IN GENETICS
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started