Mango (Mangifera indica L.) germplasm diversity based on single nucleotide polymorphisms derived from the transcriptome
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Mango (Mangifera indica L.) germplasm diversity based on single nucleotide polymorphisms derived from the transcriptome
Authors
Keywords
Mango, Genetic diversity, Transcriptome, SNP, SSR
Journal
BMC PLANT BIOLOGY
Volume 15, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-11-14
DOI
10.1186/s12870-015-0663-6
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Genetic diversity and population structure analysis of mango (Mangifera indica) cultivars assessed by microsatellite markers
- (2015) Kundapura V. Ravishankar et al. TREES-STRUCTURE AND FUNCTION
- Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening
- (2015) Mitzuko Dautt-Castro et al. Frontiers in Plant Science
- De-novo assembly of mango fruit peel transcriptome reveals mechanisms of mango response to hot water treatment
- (2014) Neta Luria et al. BMC GENOMICS
- Transcriptome and proteomic analysis of mango (Mangifera indica Linn) fruits
- (2014) Hong-xia Wu et al. Journal of Proteomics
- Characterization of mango (Mangifera indica L.) transcriptome and chloroplast genome
- (2014) M. Kamran Azim et al. PLANT MOLECULAR BIOLOGY
- Single-Nucleotide Polymorphism Markers from De-Novo Assembly of the Pomegranate Transcriptome Reveal Germplasm Genetic Diversity
- (2014) Ron Ophir et al. PLoS One
- Development of high-density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners
- (2013) Nathalie Pavy et al. Molecular Ecology Resources
- A High-Density SNP Genotyping Array for Rice Biology and Molecular Breeding
- (2013) Haodong Chen et al. Molecular Plant
- Population structure and genetic analysis of different utility types of mango (Mangifera indica L.) germplasm of Andhra Pradesh state of India using microsatellite markers
- (2013) Malathi Surapaneni et al. PLANT SYSTEMATICS AND EVOLUTION
- Cultivar identification and genetic relationship of mango (Mangifera indica) in Taiwan using 37 SSR markers
- (2013) Chi-Chu Tsai et al. SCIENTIA HORTICULTURAE
- Optimizing the allocation of resources for genomic selection in one breeding cycle
- (2013) Christian Riedelsheimer et al. THEORETICAL AND APPLIED GENETICS
- Development and characterization of 20 new polymorphic microsatellite markers from Mangifera indica (Anacardiaceae)
- (2012) Yu-Chung Chiang et al. AMERICAN JOURNAL OF BOTANY
- Whole-genome strategies for marker-assisted plant breeding
- (2012) Yunbi Xu et al. MOLECULAR BREEDING
- The draft genome of sweet orange (Citrus sinensis)
- (2012) Qiang Xu et al. NATURE GENETICS
- Genome-Wide SNP Detection, Validation, and Development of an 8K SNP Array for Apple
- (2012) David Chagné et al. PLoS One
- Development and Evaluation of a 9K SNP Array for Peach by Internationally Coordinated SNP Detection and Validation in Breeding Germplasm
- (2012) Ignazio Verde et al. PLoS One
- Genetic diversity of the Australian National Mango Genebank
- (2012) Natalie L. Dillon et al. SCIENTIA HORTICULTURAE
- Apple, from genome to breeding
- (2012) M. Troggio et al. Tree Genetics & Genomes
- Development of new microsatellite markers from Mango (Mangifera indica ) and cross-species amplification
- (2011) Kundapura Venkataramana Ravishankar et al. AMERICAN JOURNAL OF BOTANY
- De novo assembly and characterization of the carrot transcriptome reveals novel genes, new markers, and genetic diversity
- (2011) Massimo Iorizzo et al. BMC GENOMICS
- Development of genome-wide SNP assays for rice
- (2011) Susan R. McCouch et al. BREEDING SCIENCE
- Genotype and SNP calling from next-generation sequencing data
- (2011) Rasmus Nielsen et al. NATURE REVIEWS GENETICS
- Genome-wide genetic marker discovery and genotyping using next-generation sequencing
- (2011) John W. Davey et al. NATURE REVIEWS GENETICS
- Construction of a high density integrated genetic map for cucumber (Cucumis sativus L.)
- (2011) Wei-Wei Zhang et al. THEORETICAL AND APPLIED GENETICS
- Determination of genetic structure of germplasm collections: are traditional hierarchical clustering methods appropriate for molecular marker data?
- (2011) T. L. Odong et al. THEORETICAL AND APPLIED GENETICS
- Myanmar mango landraces reveal genetic uniqueness over common cultivars from Florida, India, and Southeast Asia
- (2010) R. Hirano et al. GENOME
- Characterizing the Embryonic Transcriptome of the Snail Ilyanassa
- (2010) J. D. Lambert et al. INTEGRATIVE AND COMPARATIVE BIOLOGY
- Expression profiling of various genes during the fruit development and ripening of mango
- (2010) Sagar S. Pandit et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- VarScan: variant detection in massively parallel sequencing of individual and pooled samples
- (2009) Daniel C. Koboldt et al. BIOINFORMATICS
- Comparative 454 pyrosequencing of transcripts from two olive genotypes during fruit development
- (2009) Fiammetta Alagna et al. BMC GENOMICS
- Comparison of the transcriptomes of American chestnut (Castanea dentata) and Chinese chestnut (Castanea mollissima) in response to the chestnut blight infection
- (2009) Abdelali Barakat et al. BMC PLANT BIOLOGY
- High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
- (2008) Evandro Novaes et al. BMC GENOMICS
- Development of a set of SNP markers present in expressed genes of the apple
- (2008) David Chagné et al. GENOMICS
- High-throughput functional annotation and data mining with the Blast2GO suite
- (2008) S. Gotz et al. NUCLEIC ACIDS RESEARCH
- Development and evaluation of a high-throughput, low-cost genotyping platform based on oligonucleotide microarrays in rice
- (2008) Jeremy D Edwards et al. Plant Methods
- Assessment of genetic diversity among mango (Mangifera indica L.) genotypes using RAPD markers
- (2008) Ishtiaq Ahmad Rajwana et al. SCIENTIA HORTICULTURAE
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now