Single-Nucleotide Polymorphism Markers from De-Novo Assembly of the Pomegranate Transcriptome Reveal Germplasm Genetic Diversity

Specific Pomegranate Juice Components as Potential Inhibitors of Prostate Cancer Metastasis

(2014) Lei Wang et al.   Translational Oncology

De novo characterization of the gametophyte transcriptome in bracken fern, Pteridium aquilinum

(2013) Joshua P Der et al.   BMC GENOMICS

Pearl millet [Pennisetum glaucum (L.) R. Br.] consensus linkage map constructed using four RIL mapping populations and newly developed EST-SSRs

(2013) Vengaldas Rajaram et al.   BMC GENOMICS

Development of genomic SSR markers for fingerprinting lettuce (Lactuca sativa L.) cultivars and mapping genes

(2013) Gilda Rauscher et al.   BMC PLANT BIOLOGY

Genetic diversity and population structure assessed by SSR and SNP markers in a large germplasm collection of grape

(2013) Francesco Emanuelli et al.   BMC PLANT BIOLOGY

Studying Genetic Variability of Pomegranate (Punica granatum L.) Based on Chloroplast DNA and Barcode Genes

(2013) Zahra Hajiahmadi et al.   MOLECULAR BIOTECHNOLOGY

Deep RNA-Seq uncovers the peach transcriptome landscape

(2013) Lu Wang et al.   PLANT MOLECULAR BIOLOGY

Variations and Transmission of QTL Alleles for Yield and Fiber Qualities in Upland Cotton Cultivars Developed in China

(2013) Tianzhen Zhang et al.   PLoS One

Massive Sorghum Collection Genotyped with SSR Markers to Enhance Use of Global Genetic Resources

(2013) Claire Billot et al.   PLoS One

SNP Discovery by Illumina-Based Transcriptome Sequencing of the Olive and the Genetic Characterization of Turkish Olive Genotypes Revealed by AFLP, SSR and SNP Markers

(2013) Hilal Betul Kaya et al.   PLoS One

Pomegranate biology and biotechnology: A review

(2013) Jaime A. Teixeira da Silva et al.   SCIENTIA HORTICULTURAE

Genetic characterization of pomegranate (Punica granatum L.) genotypes by AFLP markers

(2012) Sezai Ercisli et al.   BIOLOGICAL RESEARCH

Transcriptome sequencing for SNP discovery across Cucumis melo

(2012) José Blanca et al.   BMC GENOMICS

De novo sequencing and analysis of root transcriptome using 454 pyrosequencing to discover putative genes associated with drought tolerance in Ammopiptanthus mongolicus

(2012) Yijun Zhou et al.   BMC GENOMICS

Transcriptomic analysis of ‘Suli’ pear (Pyrus pyrifolia white pear group) buds during the dormancy by RNA-Seq

(2012) Guoqin Liu et al.   BMC GENOMICS

Pomegranate juice and specific components inhibit cell and molecular processes critical for metastasis of breast cancer

(2012) Ana Rocha et al.   BREAST CANCER RESEARCH AND TREATMENT

Transcriptome analysis of enriched Golovinomyces orontii haustoria by deep 454 pyrosequencing

(2012) Ralf Weßling et al.   FUNGAL GENETICS AND BIOLOGY

A novel strategy for identification of 47 pomegranate (Punica granatum) cultivars using RAPD markers

(2012) Y.P. Zhang et al.   GENETICS AND MOLECULAR RESEARCH

Transcriptome sequencing of wild chickpea as a rich resource for marker development

(2012) Shalu Jhanwar et al.   PLANT BIOTECHNOLOGY JOURNAL

SNP Discovery and Development of a High-Density Genotyping Array for Sunflower

(2012) Eleni Bachlava et al.   PLoS One

Genetic diversity analysis of elite European maize (Zea mays L.) inbred lines using AFLP, SSR, and SNP markers reveals ascertainment bias for a subset of SNPs

(2012) Elisabetta Frascaroli et al.   THEORETICAL AND APPLIED GENETICS

De novo assembly and transcriptome analysis of five major tissues of Jatropha curcas L. using GS FLX titanium platform of 454 pyrosequencing

(2011) Purushothaman Natarajan et al.   BMC GENOMICS

Whole genome sequencing of peach (Prunus persica L.) for SNP identification and selection

(2011) Riaz Ahmad et al.   BMC GENOMICS

Characterization of transcriptome dynamics during watermelon fruit development: sequencing, assembly, annotation and gene expression profiles

(2011) Shaogui Guo et al.   BMC GENOMICS

De novo assembly and characterization of the carrot transcriptome reveals novel genes, new markers, and genetic diversity

(2011) Massimo Iorizzo et al.   BMC GENOMICS

Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

(2011) José Blanca et al.   BMC GENOMICS

Transcriptome analysis of tree peony during chilling requirement fulfillment: Assembling, annotation and markers discovering

(2011) Shupeng Gai et al.   GENE

Molecular genetic diversity of Punica granatum L. (pomegranate) as revealed by microsatellite DNA markers (SSR)

(2011) Nejib Hasnaoui et al.   GENE

Genetic relationships among wild pomegranate (Punica granatum genotypes from Coruh Valley in Turkey

(2011) S. Ercisli et al.   GENETICS AND MOLECULAR RESEARCH

Genotype and SNP calling from next-generation sequencing data

(2011) Rasmus Nielsen et al.   NATURE REVIEWS GENETICS

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

De Novo Assembly of Expressed Transcripts and Global Analysis of the Phalaenopsis aphrodite Transcriptome

(2011) Chun-lin Su et al.   PLANT AND CELL PHYSIOLOGY

A pomegranate (Punica granatum L.) WD40-repeat gene is a functional homologue of Arabidopsis TTG1 and is involved in the regulation of anthocyanin biosynthesis during pomegranate fruit development

(2011) Zohar Ben-Simhon et al.   PLANTA

Genome-Wide Distribution and Organization of Microsatellites in Plants: An Insight into Marker Development in Brachypodium

(2011) Humira Sonah et al.   PLoS One

Determination of genetic structure of germplasm collections: are traditional hierarchical clustering methods appropriate for molecular marker data?

(2011) T. L. Odong et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association studies in plants: the missing heritability is in the field

(2011) Benjamin Brachi et al.   GENOME BIOLOGY

Targeted enrichment beyond the consensus coding DNA sequence exome reveals exons with higher variant densities

(2011) Matthew N Bainbridge et al.   GENOME BIOLOGY

Mining the bitter melon (momordica charantia l.) seed transcriptome by 454 analysis of non-normalized and normalized cDNA populations for conjugated fatty acid metabolism-related genes

(2010) Peizhen Yang et al.   BMC PLANT BIOLOGY

Isolation and Characterization of Novel Microsatellite Markers in Pomegranate (Punica granatum L.)

(2010) Seyed Mostafa Pirseyedi et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Color, Sugars and Organic Acids Composition in Aril Juices and Peel Homogenates Prepared from Different Pomegranate Accessions

(2010) Mery Dafny-Yalin et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Development and characterization of microsatellite markers in pomegranate (Punica granatum L.)

(2010) José Miguel Soriano et al.   MOLECULAR BREEDING

De novo sequencing of plant genomes using second-generation technologies

(2009) M. Imelfort et al.   BRIEFINGS IN BIOINFORMATICS

Tandem repeat distribution of gene transcripts in three plant families

(2009) Luciano Carlos da Maia et al.   GENETICS AND MOLECULAR BIOLOGY

Cultivar identification using 18S–28S rDNA intergenic spacer-RFLP in pomegranate (Punica granatum L.)

(2009) P. Melgarejo et al.   SCIENTIA HORTICULTURAE

SPAR profiles and genetic diversity amongst pomegranate (Punica granatum L.) genotypes

(2009) S. A. Ranade et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome

(2008) Evandro Novaes et al.   BMC GENOMICS

Eucalyptus microsatellites mined in silico: survey and evaluation

(2008) R. Yasodha et al.   JOURNAL OF GENETICS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

Characterization of Tunisian pomegranate (Punica granatum L.) cultivars using amplified fragment length polymorphism analysis

(2007) Rania Jbir et al.   SCIENTIA HORTICULTURAE