Sister species, different histories: comparative phylogeography of two bird species associated with Amazonian open vegetation

What has become of the refugia hypothesis to explain biological diversity in Amazonia?

(2019) Daniel Gomes da Rocha et al.   Ecology and Evolution

Discovering floristic and geoecological gradients across Amazonia

(2019) Hanna Tuomisto et al.   JOURNAL OF BIOGEOGRAPHY

The role of Late Pleistocene-Holocene tectono-sedimentary history on the origin of patches of savanna vegetation in the middle Madeira River, southwest of the Amazonian lowlands

(2019) Dilce de Fátima Rossetti et al.   PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY

A dynamic continental moisture gradient drove Amazonian bird diversification

(2019) Sofia Marques Silva et al.   Science Advances

Peatland forests are the least diverse tree communities documented in Amazonia, but contribute to high regional beta-diversity

(2018) Frederick C. Draper et al.   ECOGRAPHY

Biogeography and diversification of Rhegmatorhina (Aves: Thamnophilidae): Implications for the evolution of Amazonian landscapes during the Quaternary

(2018) Camila C. Ribas et al.   JOURNAL OF BIOGEOGRAPHY

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Rapid diversification and hybridization have shaped the dynamic history of the genus Elaenia

(2018) Qian Tang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The role of abrupt climate change in the formation of an open vegetation enclave in northern Amazonia during the late Quaternary

(2018) André Zular et al.   GLOBAL AND PLANETARY CHANGE

Evolving in isolation: Genetic tests reject recent connections of Amazonian savannas with the central Cerrado

(2018) Luciana C. Resende-Moreira et al.   JOURNAL OF BIOGEOGRAPHY

Hydroclimate changes across the Amazon lowlands over the past 45,000 years

(2017) Xianfeng Wang et al.   NATURE

Bird Communities in Amazonian White-Sand Vegetation Patches: Effects of Landscape Configuration and Biogeographic Context

(2016) Sergio H. Borges et al.   BIOTROPICA

Comparative Phylogeography of Two Bird Species,Tachyphonus phoenicius(Thraupidae) andPolytmus theresiae(Trochilidae), Specialized in Amazonian White-sand Vegetation

(2016) Maysa V. Matos et al.   BIOTROPICA

White-sand Ecosystems in Amazonia

(2016) J. Marion Adeney et al.   BIOTROPICA

Biogeography of the Neotropical genus Malacoptila (Aves: Bucconidae): the influence of the Andean orogeny, Amazonian drainage evolution and palaeoclimate

(2016) Mateus Ferreira et al.   JOURNAL OF BIOGEOGRAPHY

Toward a paradigm shift in comparative phylogeography driven by trait-based hypotheses

(2016) Anna Papadopoulou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

What is the avifauna of Amazonian white-sand vegetation?

(2015) SÉRGIO HENRIQUE BORGES et al.   BIRD CONSERVATION INTERNATIONAL

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Timing the diversification of the Amazonian biota: butterfly divergences are consistent with Pleistocene refugia

(2014) Ivonne J. Garzón-Orduña et al.   JOURNAL OF BIOGEOGRAPHY

Combining phylogeography and landscape genetics ofXenopipo atronitens(Aves: Pipridae), a white sandcampinaspecialist, to understand Pleistocene landscape evolution in Amazonia

(2013) João Marcos G. Capurucho et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Climate change patterns in Amazonia and biodiversity

(2013) Hai Cheng et al.   Nature Communications

Multilocus phylogeography of the Wedge-billed Woodcreeper Glyphorynchus spirurus (Aves, Furnariidae) in lowland Amazonia: Widespread cryptic diversity and paraphyly reveal a complex diversification pattern

(2012) Alexandre M. Fernandes et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Evaluating the role of contracting and expanding rainforest in initiating cycles of speciation across the Isthmus of Panama

(2012) B. T. Smith et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Multilocus Resolution of Phylogeny and Timescale in the Extant Adaptive Radiation of Hawaiian Honeycreepers

(2011) Heather R.L. Lerner et al.   CURRENT BIOLOGY

Dynamic boundary-monsoon intensity hypothesis: evidence from the deglacial Amazon River discharge record

(2011) M.A. Maslin et al.   QUATERNARY SCIENCE REVIEWS

Contrasting patterns of phylogeographic relationships in sympatric sister species of ironclad beetles (Zopheridae: Phloeodes spp.) in California's Transverse Ranges

(2010) Maxi Polihronakis et al.   BMC EVOLUTIONARY BIOLOGY

Bayesian inference of population size history from multiple loci

(2008) Joseph Heled et al.   BMC EVOLUTIONARY BIOLOGY

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

Speciation timing and neotropical biodiversity: the Tertiary-Quaternary debate in the light of molecular phylogenetic evidence

(2008) VALENTÍ RULL   MOLECULAR ECOLOGY

Calibrating the avian molecular clock

(2008) J. T. WEIR et al.   MOLECULAR ECOLOGY

Phylogenetic relationships of tyrant-flycatchers (Aves: Tyrannidae), with an emphasis on the elaeniine assemblage

(2007) Frank E. Rheindt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION