Comparative Phylogeography of Two Bird Species,Tachyphonus phoenicius(Thraupidae) andPolytmus theresiae(Trochilidae), Specialized in Amazonian White-sand Vegetation

Bird Communities in Amazonian White-Sand Vegetation Patches: Effects of Landscape Configuration and Biogeographic Context

(2016) Sergio H. Borges et al.   BIOTROPICA

What is the avifauna of Amazonian white-sand vegetation?

(2015) SÉRGIO HENRIQUE BORGES et al.   BIRD CONSERVATION INTERNATIONAL

Genomic variation in a widespread Neotropical bird (Xenops minutus) reveals divergence, population expansion, and gene flow

(2015) Michael G. Harvey et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Cryptic speciation in the white-shouldered antshrike (Thamnophilus aethiops, Aves – Thamnophilidae): The tale of a transcontinental radiation across rivers in lowland Amazonia and the northeastern Atlantic Forest

(2015) Gregory Thom et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Molecular Phylogenetics and the Diversification of Hummingbirds

(2014) Jimmy A. McGuire et al.   CURRENT BIOLOGY

Multiple speciation across the Andes and throughout Amazonia: the case of the spot-backed antbird species complex (Hylophylax naevius/Hylophylax naevioides)

(2014) Alexandre M. Fernandes et al.   JOURNAL OF BIOGEOGRAPHY

Phylogenetics and diversification of tanagers (Passeriformes: Thraupidae), the largest radiation of Neotropical songbirds

(2014) Kevin J. Burns et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Combining phylogeography and landscape genetics ofXenopipo atronitens(Aves: Pipridae), a white sandcampinaspecialist, to understand Pleistocene landscape evolution in Amazonia

(2013) João Marcos G. Capurucho et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Cryptic patterns of diversification of a widespread Amazonian Woodcreeper species complex (Aves: Dendrocolaptidae) inferred from multilocus phylogenetic analysis: Implications for historical biogeography and taxonomy

(2013) Tiago Sousa-Neves et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Late Pleistocene glacial forest of Humaitá—Western Amazonia

(2013) M.C.L. Cohen et al.   PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY

The Hill of Six Lakes revisited: new data and re-evaluation of a key Pleistocene Amazon site

(2013) Carlos D'Apolito et al.   QUATERNARY SCIENCE REVIEWS

Bird species distribution in a complex Amazonian landscape: species diversity, compositional variability and biotic–environmental relationships

(2013) Sérgio Henrique Borges   STUDIES ON NEOTROPICAL FAUNA AND ENVIRONMENT

Climate change patterns in Amazonia and biodiversity

(2013) Hai Cheng et al.   Nature Communications

Inferring the origins of lowland Neotropical birds

(2012)   AUK

ANCIENT TEPUI SUMMITS HARBOR YOUNG RATHER THAN OLD LINEAGES OF ENDEMIC FROGS

(2012) Patricia E. Salerno et al.   EVOLUTION

Late Quaternary sedimentary dynamics in Western Amazonia: Implications for the origin of open vegetation/forest contrasts

(2012) D.F. Rossetti et al.   GEOMORPHOLOGY

Phylogeny and comparative phylogeography ofSclerurus(Aves: Furnariidae) reveal constant and cryptic diversification in an old radiation of rain forest understorey specialists

(2012) Fernando M. d’Horta et al.   JOURNAL OF BIOGEOGRAPHY

Influence of landscape evolution on the distribution of floristic patterns in northern Amazonia revealed by δ13C data

(2012) H. Zani et al.   JOURNAL OF QUATERNARY SCIENCE

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

A palaeobiogeographic model for biotic diversification within Amazonia over the past three million years

(2011) C. C. Ribas et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Neotropical biodiversity: timing and potential drivers

(2011) Valentí Rull   TRENDS IN ECOLOGY & EVOLUTION

Red- and yellow-footed tortoises, Chelonoidis carbonaria and C. denticulata (Reptilia: Testudines: Testudinidae), in South American savannahs and forests: do their phylogeographies reflect distinct habitats?

(2010) Mario Vargas-Ramírez et al.   ORGANISMS DIVERSITY & EVOLUTION

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Isolation with Migration Models for More Than Two Populations

(2009) Jody Hey   MOLECULAR BIOLOGY AND EVOLUTION

Bayesian Inference of Species Trees from Multilocus Data

(2009) J. Heled et al.   MOLECULAR BIOLOGY AND EVOLUTION

Habitat shifts in the evolutionary history of a Neotropical flycatcher lineage from forest and open landscapes

(2008) Frank E Rheindt et al.   BMC EVOLUTIONARY BIOLOGY

Divergence in Zygodontomys (Rodentia: Sigmodontinae) and Distribution of Amazonian Savannas

(2008) C. R. Bonvicino et al.   JOURNAL OF HEREDITY

Calibrating the avian molecular clock

(2008) J. T. WEIR et al.   MOLECULAR ECOLOGY