Community assembly of bacteria and archaea in coastal waters governed by contrasting mechanisms: A seasonal perspective
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Title
Community assembly of bacteria and archaea in coastal waters governed by contrasting mechanisms: A seasonal perspective
Authors
Keywords
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Journal
MOLECULAR ECOLOGY
Volume 29, Issue 19, Pages 3762-3776
Publisher
Wiley
Online
2020-08-28
DOI
10.1111/mec.15600
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- (2017) Carina Bunse et al. TRENDS IN MICROBIOLOGY
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- (2016) Lijuan Ren et al. ISME Journal
- Patterns and processes in microbial biogeography: do molecules and morphologies give the same answers?
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- (2016) David M. Needham et al. Nature Microbiology
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- (2015) A Apprill et al. AQUATIC MICROBIAL ECOLOGY
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- (2015) Yongjun Liu et al. SOIL BIOLOGY & BIOCHEMISTRY
- Estimating and mapping ecological processes influencing microbial community assembly
- (2015) James C. Stegen et al. Frontiers in Microbiology
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- Differential abundance analysis for microbial marker-gene surveys
- (2013) Joseph N Paulson et al. NATURE METHODS
- Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient
- (2012) Barbara J Campbell et al. ISME Journal
- Stochastic and deterministic assembly processes in subsurface microbial communities
- (2012) James C Stegen et al. ISME Journal
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- (2012) Nicholas A Bokulich et al. NATURE METHODS
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- (2012) China A. Hanson et al. NATURE REVIEWS MICROBIOLOGY
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- (2012) Anna Klindworth et al. NUCLEIC ACIDS RESEARCH
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- (2010) S. W. Kembel et al. BIOINFORMATICS
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