Nearly a decade-long repeatable seasonal diversity patterns of bacterioplankton communities in the eutrophic Lake Donghu (Wuhan, China)

Environmental filtering decreases with fish development for the assembly of gut microbiota

(2016) Qingyun Yan et al.   ENVIRONMENTAL MICROBIOLOGY

pH Influences the Importance of Niche-Related and Neutral Processes in Lacustrine Bacterioplankton Assembly

(2015) Lijuan Ren et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis

(2015) Liyou Wu et al.   BMC MICROBIOLOGY

Marine microbial community dynamics and their ecological interpretation

(2015) Jed A. Fuhrman et al.   NATURE REVIEWS MICROBIOLOGY

Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession

(2015) Francisco Dini-Andreote et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Estimating and mapping ecological processes influencing microbial community assembly

(2015) James C. Stegen et al.   Frontiers in Microbiology

Impacts of the Three Gorges Dam on microbial structure and potential function

(2015) Qingyun Yan et al.   Scientific Reports

Spatiotemporal pattern of bacterioplankton in Donghu Lake

(2014) Xiang Zhang et al.   CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY

Seasonal and interannual variability of the marine bacterioplankton community throughout the water column over ten years

(2014) Jacob A Cram et al.   ISME Journal

Functional and phylogenetic assembly of microbial communities in the human microbiome

(2014) Afrah Shafquat et al.   TRENDS IN MICROBIOLOGY

Quantifying community assembly processes and identifying features that impose them

(2013) James C Stegen et al.   ISME Journal

Changes in assembly processes in soil bacterial communities following a wildfire disturbance

(2013) Scott Ferrenberg et al.   ISME Journal

Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight

(2013) Cheryl-Emiliane T Chow et al.   ISME Journal

Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes

(2013) Jianjun Wang et al.   ISME Journal

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Biogeography of bacterial communities exposed to progressive long-term environmental change

(2012) Ramiro Logares et al.   ISME Journal

A decade of seasonal dynamics and co-occurrences within freshwater bacterioplankton communities from eutrophic Lake Mendota, WI, USA

(2012) Emily L Kara et al.   ISME Journal

Cross-biome metagenomic analyses of soil microbial communities and their functional attributes

(2012) N. Fierer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temporal variation of β-diversity and assembly mechanisms in a bacterial metacommunity

(2011) Silke Langenheder et al.   ISME Journal

Spatial variability overwhelms seasonal patterns in bacterioplankton communities across a river to ocean gradient

(2011) Caroline S Fortunato et al.   ISME Journal

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

Using null models to disentangle variation in community dissimilarity from variation in α-diversity

(2011) Jonathan M. Chase et al.   Ecosphere

Non-Random Assembly of Bacterioplankton Communities in the Subtropical North Pacific Ocean

(2011) Alexander Eiler et al.   Frontiers in Microbiology

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

Microbial community structure and its functional implications

(2009) Jed A. Fuhrman   NATURE

Spatiotemporal heterogeneity of plankton communities in Lake Donghu, China, as revealed by PCR–denaturing gradient gel electrophoresis and its relation to biotic and abiotic factors

(2008) Yuhe Yu et al.   FEMS MICROBIOLOGY ECOLOGY

A latitudinal diversity gradient in planktonic marine bacteria

(2008) J. A. Fuhrman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial Ecology of Ocean Biogeochemistry: A Community Perspective

(2008) S. L. Strom   SCIENCE