Seasonal rather than spatial variability drives planktonic and benthic bacterial diversity in a microtidal lagoon and the adjacent open sea

Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria

(2016) Alexander Eiler et al.   ISME Journal

Salinity is the major factor influencing the sediment bacterial communities in a Mediterranean lagoonal complex (Amvrakikos Gulf, Ionian Sea)

(2016) Christina Pavloudi et al.   Marine Genomics

Terrestrial origin of bacterial communities in complex boreal freshwater networks

(2015) Clara Ruiz-González et al.   ECOLOGY LETTERS

Seasonality in molecular and cytometric diversity of marine bacterioplankton: the re-shuffling of bacterial taxa by vertical mixing

(2015) Francisca C. García et al.   ENVIRONMENTAL MICROBIOLOGY

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

(2015) Ramon Massana et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial diversity along a 2600 km river continuum

(2015) Domenico Savio et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial biogeography in the coastal waters of northern Zhejiang, East China Sea is highly controlled by spatially structured environmental gradients

(2015) Kai Wang et al.   ENVIRONMENTAL MICROBIOLOGY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Marine microbial community dynamics and their ecological interpretation

(2015) Jed A. Fuhrman et al.   NATURE REVIEWS MICROBIOLOGY

Bacterial diversity of polluted surface sediments in the northern Adriatic Sea

(2015) Marino Korlević et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Distribution of Escherichia coli in a coastal lagoon (Venice, Italy): Temporal patterns, genetic diversity and the role of tidal forcing

(2015) L. Perini et al.   WATER RESEARCH

Patterns of benthic bacterial diversity in coastal areas contaminated by heavy metals, polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs)

(2015) Grazia Marina Quero et al.   Frontiers in Microbiology

Phylogenetic Differences in Attached and Free-Living Bacterial Communities in a Temperate Coastal Lagoon during Summer, Revealed via High-Throughput 16S rRNA Gene Sequencing

(2014) Vani Mohit et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Do lagoon area sediments act as traps for polycyclic aromatic hydrocarbons?

(2014) Mauro Marini et al.   CHEMOSPHERE

Toward homogenization of Mediterranean lagoons and their loss of hydrodiversity

(2014) Christian Ferrarin et al.   GEOPHYSICAL RESEARCH LETTERS

Diversity of rare and abundant bacteria in surface waters of the Southern Adriatic Sea

(2014) Grazia Marina Quero et al.   Marine Genomics

Beta diversity of marine bacteria depends on temporal scale

(2013) Stephen M. Hatosy et al.   ECOLOGY

Core sediment bacteria drive community response to anthropogenic contamination over multiple environmental gradients

(2013) Melanie Y. Sun et al.   ENVIRONMENTAL MICROBIOLOGY

An overview of ecological status, vulnerability and future perspectives of European large shallow, semi-enclosed coastal systems, lagoons and transitional waters

(2013) Alice Newton et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Ocean Warming and Spread of Pathogenic Vibrios in the Aquatic Environment

(2013) Luigi Vezzulli et al.   MICROBIAL ECOLOGY

Looking for patterns in the phytoplankton community of the Mediterranean microtidal Venice Lagoon: evidence from ten years of observations

(2013) Fabrizio Bernardi Aubry et al.   SCIENTIA MARINA

A Guide to Enterotypes across the Human Body: Meta-Analysis of Microbial Community Structures in Human Microbiome Datasets

(2013) Omry Koren et al.   PLoS Computational Biology

Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient

(2012) Barbara J Campbell et al.   ISME Journal

Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom

(2012) H. Teeling et al.   SCIENCE

The ecological roles of bacterial populations in the surface sediments of coastal lagoon environments in Japan as revealed by quantification and qualification of 16S rDNA

(2012) Shun Tsuboi et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Metagenomes of Mediterranean Coastal Lagoons

(2012) Rohit Ghai et al.   Scientific Reports

Spatial variability overwhelms seasonal patterns in bacterioplankton communities across a river to ocean gradient

(2011) Caroline S Fortunato et al.   ISME Journal

Diversity and dynamics of rare and of resident bacterial populations in coastal sands

(2011) Angélique Gobet et al.   ISME Journal

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Coherent dynamics and association networks among lake bacterioplankton taxa

(2011) Alexander Eiler et al.   ISME Journal

A Guide to the Natural History of Freshwater Lake Bacteria

(2011) R. J. Newton et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Global Patterns of Bacterial Beta-Diversity in Seafloor and Seawater Ecosystems

(2011) Lucie Zinger et al.   PLoS One

Detecting Novel Associations in Large Data Sets

(2011) D. N. Reshef et al.   SCIENCE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Phytoplankton-bacterioplankton interactions and carbon fluxes through microbial communities in a microtidal lagoon

(2010) Alessandra Pugnetti et al.   FEMS MICROBIOLOGY ECOLOGY

Spatiotemporal Variation of Bacterial Community Composition and Possible Controlling Factors in Tropical Shallow Lagoons

(2010) Thaís Laque et al.   MICROBIAL ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Bacterioplankton diversity and community composition in the Southern Lagoon of Venice

(2010) Francesca Simonato et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Structural dynamics of bacterioplankton assemblages in the Lagoon of Venice

(2009) Mauro Celussi et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Bacterial diversity of water and sediment in the Changjiang estuary and coastal area of the East China Sea

(2009) Bi-Wei Feng et al.   FEMS MICROBIOLOGY ECOLOGY

Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands

(2009) Simone I Böer et al.   ISME Journal

Current state, scales of variability, and trends of biogeochemical properties in the northern Adriatic Sea

(2009) Cosimo Solidoro et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Biodiversity of prokaryotic communities in sediments of different sub-basins of the Venice lagoon

(2009) Sara Borin et al.   RESEARCH IN MICROBIOLOGY

Mixed-effects modeling with crossed random effects for subjects and items

(2008) R.H. Baayen et al.   JOURNAL OF MEMORY AND LANGUAGE

Analysis of multitrophic plankton assemblages in the Lagoon of Venice

(2008) V Bandelj et al.   MARINE ECOLOGY PROGRESS SERIES

Thirty-year changes (1970 to 2000) in bathymetry and sediment texture recorded in the Lagoon of Venice sub-basins, Italy

(2008) Emanuela Molinaroli et al.   MARINE GEOLOGY