Large scale patterns of marine diatom richness: Drivers and trends in a changing ocean

Phytoplankton in the Tara Ocean

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Community-Level Responses to Iron Availability in Open Ocean Planktonic Ecosystems

(2019) Luigi Caputi et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Global pattern of phytoplankton diversity driven by temperature and environmental variability

(2019) Damiano Righetti et al.   Science Advances

Global Trends in Marine Plankton Diversity across Kingdoms of Life

(2019) Federico M. Ibarbalz et al.   CELL

A Satellite-Based Lagrangian View on Phytoplankton Dynamics

(2018) Yoav Lehahn et al.   Annual Review of Marine Science

Nanoplanktonic diatoms are globally overlooked but play a role in spring blooms and carbon export

(2018) Karine Leblanc et al.   Nature Communications

Estimating intraspecific genetic diversity from community DNA metabarcoding data

(2018) Vasco Elbrecht et al.   PeerJ

The case of the diatoms and the muddled mandalas: Time to recognize diatom adaptations to stratified waters

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Diatom diversity through HTS-metabarcoding in coastal European seas

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The role of intraspecific variation in the ecological and evolutionary success of diatoms in changing environments

(2017) Anna Godhe et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition

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Is metabarcoding suitable for estuarine plankton monitoring? A comparative study with microscopy

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Censusing marine eukaryotic diversity in the twenty-first century

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Insights into global diatom distribution and diversity in the world’s ocean

(2016) Shruti Malviya et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

VSEARCH: a versatile open source tool for metagenomics

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Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

(2015) Ramon Massana et al.   ENVIRONMENTAL MICROBIOLOGY

Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding

(2015) Noan Le Bescot et al.   ENVIRONMENTAL MICROBIOLOGY

Scraping the bottom of the barrel: are rare high throughput sequences artifacts?

(2015) Shawn P. Brown et al.   Fungal Ecology

The dynamical landscape of marine phytoplankton diversity

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Ecology and exploration of the rare biosphere

(2015) Michael D. J. Lynch et al.   NATURE REVIEWS MICROBIOLOGY

Eukaryotic plankton diversity in the sunlit ocean

(2015) C. de Vargas et al.   SCIENCE

Sampling the limits of species richness in marine phytoplankton communities

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Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies

(2014) Jonas Zimmermann et al.   Molecular Ecology Resources

Global relationship between phytoplankton diversity and productivity in the ocean

(2014) S. M. Vallina et al.   Nature Communications

Swarm: robust and fast clustering method for amplicon-based studies

(2014) Frédéric Mahé et al.   PeerJ

An Inordinate Fondness? The Number, Distributions, and Origins of Diatom Species

(2013) David G. Mann et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System

(2013) Sujeevan Ratnasingham et al.   PLoS One

Global surface eddy diffusivities derived from satellite altimetry

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Genetic diversity within and genetic differentiation between blooms of a microalgal species

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The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy

(2012) Laure Guillou et al.   NUCLEIC ACIDS RESEARCH

A Global Pattern of Thermal Adaptation in Marine Phytoplankton

(2012) M. K. Thomas et al.   SCIENCE

Global patterns and predictors of marine biodiversity across taxa

(2010) Derek P. Tittensor et al.   NATURE

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Marine biodiversity, ecosystem functioning, and carbon cycles

(2010) G. Beaugrand et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fluid dynamical niches of phytoplankton types

(2010) F. d'Ovidio et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Patterns of Diversity in Marine Phytoplankton

(2010) A. D. Barton et al.   SCIENCE

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Hypotheses on the role of the protistan rare biosphere in a changing world

(2009) DA Caron et al.   AQUATIC MICROBIAL ECOLOGY

Modeling the coupling of ocean ecology and biogeochemistry

(2009) S. Dutkiewicz et al.   GLOBAL BIOGEOCHEMICAL CYCLES