A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Glacial cycles as an allopatric speciation pump in north-eastern American freshwater fishes

(2012) Julien April et al.   MOLECULAR ECOLOGY

DNA barcoding a regional fauna: Irish solitary bees

(2012) Karl N. Magnacca et al.   Molecular Ecology Resources

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Allopatry as a Gordian Knot for Taxonomists: Patterns of DNA Barcode Divergence in Arctic-Alpine Lepidoptera

(2012) Marko Mutanen et al.   PLoS One

Revealing the Hyperdiverse Mite Fauna of Subarctic Canada through DNA Barcoding

(2012) Monica R. Young et al.   PLoS One

Testing the Species–Genetic Diversity Correlation in the Aegean Archipelago: Toward a Haplotype-Based Macroecology?

(2011) Anna Papadopoulou et al.   AMERICAN NATURALIST

Clustering 16S rRNA for OTU prediction: a method of unsupervised Bayesian clustering

(2011) Xiaolin Hao et al.   BIOINFORMATICS

CLOTU: An online pipeline for processing and clustering of 454 amplicon reads into OTUs followed by taxonomic annotation

(2011) Surendra Kumar et al.   BMC BIOINFORMATICS

ABGD, Automatic Barcode Gap Discovery for primary species delimitation

(2011) N. PUILLANDRE et al.   MOLECULAR ECOLOGY

Deep mtDNA subdivision within Linnean species in an endemic radiation of tiger beetles from New Zealand (genus Neocicindela)

(2011) Joan Pons et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

DNA Barcoding the Geometrid Fauna of Bavaria (Lepidoptera): Successes, Surprises, and Questions

(2011) Axel Hausmann et al.   PLoS One

jMOTU and Taxonerator: Turning DNA Barcode Sequences into Annotated Operational Taxonomic Units

(2011) Martin Jones et al.   PLoS One

A Tri-Oceanic Perspective: DNA Barcoding Reveals Geographic Structure and Cryptic Diversity in Canadian Polychaetes

(2011) Christina M. Carr et al.   PLoS One

Soil rotifer communities are extremely diverse globally but spatially autocorrelated locally

(2011) M. S. Robeson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The costs of describing the entire animal kingdom

(2011) Fernando Carbayo et al.   TRENDS IN ECOLOGY & EVOLUTION

How Many Species Are There on Earth and in the Ocean?

(2011) Camilo Mora et al.   PLOS BIOLOGY

DNA Barcoding of Marine Metazoa

(2010) Ann Bucklin et al.   Annual Review of Marine Science

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

DNA barcodes for 1/1000 of the animal kingdom

(2009) P. D. N. Hebert et al.   Biology Letters

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

(2009) M. Buée et al.   NEW PHYTOLOGIST

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Probing Evolutionary Patterns in Neotropical Birds through DNA Barcodes

(2009) Kevin C. R. Kerr et al.   PLoS One

Accelerated Species Inventory on Madagascar Using Coalescent-Based Models of Species Delineation

(2009) Michael T. Monaghan et al.   SYSTEMATIC BIOLOGY

High diversity of fungi associated with living parts of boreal forest bryophytes

(2008) Håvard Kauserud et al.   Botany

Identifying Canadian Freshwater Fishes through DNA Barcodes

(2008) Nicolas Hubert et al.   PLoS One

Graph Clustering Via a Discrete Uncoupling Process

(2008) Stijn Van Dongen   SIAM JOURNAL ON MATRIX ANALYSIS AND APPLICATIONS

Perspectives: Cryptic species diversity should not be trivialised

(2008) Peter Trontelj et al.   SYSTEMATICS AND BIODIVERSITY